Gene Dhaf_3910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3910 
Symbol 
ID7260931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp4145564 
End bp4146694 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content55% 
IMG OID643563833 
ProductCysteine desulfurase 
Protein accessionYP_002460361 
Protein GI219669926 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID[TIGR01977] cysteine desulfurase family protein 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCTATT TTGACAATAG CGCCACAACC CTCATCAAGC CGCCGGAAGT CGGTGAAGCG 
GTAGCTTACG CTATCAACCA TTTCGGCAAT GCCAGCCGTT CCTTTTACGA TGCCGCCATG 
ACGGCCAGCC GGGAAATTTA CAGGACCAGA GCGGCCATCG CCGCTTTGGT CGGCTCCGCT 
GAGCCCCTGA ATATAGCATT TACCTCCTCT TCCACCGAGA GTCTCAATCT GGTCATCGGC 
GGCCTGGTGA AGCAGGAGGA CGCCGTCATT ACCACCGTGA CGGAGCACAA TTCGGTCCTG 
AGGCCCCTCT ATCTCAAAGG ATGCCGGCTG GATTTCATCG ACTGCGATGA GAATGGAGTT 
TTACAGTGGG ATGCTTTTGA AGAGCTGATC AGGCCGGAAA CCCGCTTTCT CATCTGCACC 
CATGGGTCCA ATGTTACCGG CAATATTACG GAAGTTAAAC GCCTCTATGA CCTGTGCCGG 
GCTCATGATC TGACCATGAT TCTCGATGTT TCCCAGACCA TGGGGCTGAT TCCCGTCAGC 
GGGGATATGG CCGACGTGCT CTGCTTTACG GGCCATAAGG GCCTGTTCGG CCCCCAGGGC 
ACGGGGGGGA TCATTGTCAA CCGCCGGCTG CCCTTTGAGA TTGTCAAGAC AGGGGGCGCA 
GGGGTACACA GCTTTGCCAT GTTCCAGCAA AATGAGATGC CCGACGTTTT TGAAGCCGGC 
ACTCTGAACA GCCATAGCCT TTACGGCCTG CAAAAAGGGG TGGAGTTTAT TCTCCATACA 
GGCATCGAGG CCATTCACAG CAGAGAAAAC CGCTTGACCC AGTTGTTTGT GGAGGGCATC 
AAAGAGATCG AAGGCCTCAG GCTTTACGGG GATTTTTCCG GCGGTAACAG GCTGCCGGTG 
GTTTCCTTGA ATATAGAGGG ACTCCCGGCC TCCGACCTGG CCGGGCTGCT TTGGGAAAAA 
TACGGGATCG CCACCCGGGC CGGCAGCCAT TGTGCCCCCC TTCTTCATCA GCGATTCAAA 
ACCGTGGAAA CGGGGATGGT CAGATTTTCT TTTTCCTATT TCAATACTGA AGAAGAAATT 
GCCACCGGGA GCAGGGCCCT GAAAACTATT GCGGAAGAGT ATGGTCGATA A
 
Protein sequence
MIYFDNSATT LIKPPEVGEA VAYAINHFGN ASRSFYDAAM TASREIYRTR AAIAALVGSA 
EPLNIAFTSS STESLNLVIG GLVKQEDAVI TTVTEHNSVL RPLYLKGCRL DFIDCDENGV 
LQWDAFEELI RPETRFLICT HGSNVTGNIT EVKRLYDLCR AHDLTMILDV SQTMGLIPVS 
GDMADVLCFT GHKGLFGPQG TGGIIVNRRL PFEIVKTGGA GVHSFAMFQQ NEMPDVFEAG 
TLNSHSLYGL QKGVEFILHT GIEAIHSREN RLTQLFVEGI KEIEGLRLYG DFSGGNRLPV 
VSLNIEGLPA SDLAGLLWEK YGIATRAGSH CAPLLHQRFK TVETGMVRFS FSYFNTEEEI 
ATGSRALKTI AEEYGR