| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3888 |
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| Symbol | |
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| ID | 7260909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 4121960 |
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| End bp | 4123741 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643563812 |
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| Product | ABC transporter related |
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| Protein accession | YP_002460340 |
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| Protein GI | 219669905 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR01166] cobalt transport protein ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000491175 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGACAG TGATTGAATT AAGAGATGTT TCTTATCGTT ATCCAAGAGC TGAAGAGGAG
AGTTTAAAAC AAGTCAGCCT GGCAGTGGCC AAAGGAAAAT TCATCGCTTT GATGGGTCCC
ACGGGAGCAG GTAAAACAAC CTTAAGCTTG TGTCTGAATG GTTTGATTCC CCAGTTTCTG
CAAGGAGAGC TGCAGGGAGA GGTCAGGATT GGGGGGGAAG AGACACGTGA GGTCCGGGTG
CAGGACCTGG CTAAGCAAGT AGGGCTTGTA CTTCAGGATG CAGAAAGTCA GATCGTCGGG
CGAACAGTGG GGGAGGATGT GGCTTTTGGC CCTCGTAATT TCGGTGTACC CCTGCAGGAA
ATTCACCGAA GGGTTGCCCA GGCCTTGGCC AAAGTCCGGC TGAATGGCTA TGATCAGCGC
TCTACAGCGG AGCTGTCCGG CGGGGAAAAA CAACGGCTGG TGATCGCCGG AGTGCTGGCC
CTGGAACCGG AACTATTGGT CATGGATGAA CCGGCTTCTG AACTGGATCC GGAAGGACGG
TTCCAGGTCT ATCGCACCTT GGATGATCTC TGTCGTGAAA AAGAGCGGAC GATTCTTGTC
GTCGAGCACT CCAGTGAAGA AATTCTGCAT AGAGCCCACG AAGTTATCGT ACTTAAGCAC
GGGAAAGTTG CCTGGCAAGG GATACCGGAA CAGCTTTTCC GCAATATCCC TCTTTTGCAG
GAATTCGGGA TCAAGCCCTT GCCAGTCAGC TTATTAGGCT GGAGTTTTTG GCAAAGAGGA
TGGATTGAAG GCCAGGACAT TCCTTTGGAT GTTGCCGAGG CGGAATCCCT GATCCGCAAT
TTAATAGGGC GGCCCAGCCT ACAAAACAGA GTGGTCCCGC CGAGTGAGCC GCCGGCAAGA
GGCAAAGTCC ATCAAGAAAA GGAAGCAGAG AAGAGCTCAC TGAATTCAGC CTTGATTCAA
ATTACGCAGC TTGTGCACCG ATTTGAATCG GGACAAATAG GCGTACAGGG GATTGATCTG
ACCATTGAAA AGGGAGAATT TGTGGCTTTG GCAGGCTCCA ATGGAGCCGG AAAAACCACT
TTAGCCAAAC ACATCAATGG CTTGCTTAAG CCCACCGAGG GGGAAGTTAT CGTCAAGGGC
CTGAATACTA AAGATGTTGA CACGGCCCAG TTAGCCAAAA CTGTCGGCTA TGTGTTCCAG
AACCCTGATC ACCAGATCTT TTCCGTCTCG GTAGAGAAGG AGCTGGAGTT TGGCCTGAAG
AACGCCGGCT TTACCAGGAC GGAGATTGCA GAGAGGATCA CCCAGGCCTT GGCCTTAACC
GGGCTGGAAA ACTATCGTCA GGTTCATCCC TACACTCTAA GTAAAGGGGA AAGGCAGTTC
ATCGCCGTGG CTTCCGTTTT AGCCCTTACC CCGGAAATTC TCGTCATTGA TGAACCGACG
ACAGGTCTCG ATTGGGTGGG GGTGGAGAAA ATTATGAAGC TGCTTCAGCA GCTCCATAGA
AAGGGGACCA CCATTCTGAT GATCAGCCAT GATATGGACA GTGTTGCCGA CTATGCCGAA
CGGGTGATCA TTTTGCGGGA GGGTCAGGTG ATGATCGATG CCCCTCCCTG GGAGGCTTTT
GCTGATGAAT CCATGCTCCG GCAGGCGGCA GTCCTTCCTC CCCAATTATG CGTCTTAAAT
CAAAGACTGC AGGATTTGGG CTATTCTGCC CAATCGGCTG AGGAATTCAG GCAGGCATTG
TTCCAGCTCA TTGAGGAGGG GGAAAGGAAA CCTTGTTTAT AG
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| Protein sequence | METVIELRDV SYRYPRAEEE SLKQVSLAVA KGKFIALMGP TGAGKTTLSL CLNGLIPQFL
QGELQGEVRI GGEETREVRV QDLAKQVGLV LQDAESQIVG RTVGEDVAFG PRNFGVPLQE
IHRRVAQALA KVRLNGYDQR STAELSGGEK QRLVIAGVLA LEPELLVMDE PASELDPEGR
FQVYRTLDDL CREKERTILV VEHSSEEILH RAHEVIVLKH GKVAWQGIPE QLFRNIPLLQ
EFGIKPLPVS LLGWSFWQRG WIEGQDIPLD VAEAESLIRN LIGRPSLQNR VVPPSEPPAR
GKVHQEKEAE KSSLNSALIQ ITQLVHRFES GQIGVQGIDL TIEKGEFVAL AGSNGAGKTT
LAKHINGLLK PTEGEVIVKG LNTKDVDTAQ LAKTVGYVFQ NPDHQIFSVS VEKELEFGLK
NAGFTRTEIA ERITQALALT GLENYRQVHP YTLSKGERQF IAVASVLALT PEILVIDEPT
TGLDWVGVEK IMKLLQQLHR KGTTILMISH DMDSVADYAE RVIILREGQV MIDAPPWEAF
ADESMLRQAA VLPPQLCVLN QRLQDLGYSA QSAEEFRQAL FQLIEEGERK PCL
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