Gene Dhaf_3881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3881 
Symbol 
ID7260902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp4116617 
End bp4117267 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content46% 
IMG OID643563805 
Productcobalamin B12-binding domain protein 
Protein accessionYP_002460333 
Protein GI219669898 
COG category[R] General function prediction only 
COG ID[COG5012] Predicted cobalamin binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0000148578 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGATT TTGGCACGAC TGAAGAACTC TTGATCAATT ATGTGGAACA ACTCGAAGAA 
ACTAAAGTCT TTGAGCTTGC CAATCATGCT TTAGACCAAG GGATGAATCC TTTAGACCTG 
GTCAACTTAA TCATCGAAGG GATGAGCCGG GTGGGCAAAC GCTACGAAGC AAAGGAGTAT 
TATATCGCCG ACCTGATCAT GGCAGGCATC ATTTTTCGGG GAGTTTTGGA GCTGAAGCCT 
ATGACATCGT ATTTCAGCAG CCATCACAAA AAGAAAAGCG GGAAGGTGCT CCTGGGCACT 
GTCAAAGACG ATATCCATGA TATTGGCAAA GAGATTTTCC GGGCCTTGCT GGAAACCCAT 
GGCTTTGAAG TCCTGGATCT TGGTGTGGAT GTATCCGGGG AAACCTTTGT CAAAAAGACC 
AGGGAGTTTA AGCCTGATAT CATTGGACTG AGCGGAGTGT TAACCAGCAC TATCGATCAA 
ATGAAACAGG TCATCGACAT TTTAGCCGCT GCAGGACTGA AGGACCAAGT CAGGATTATC 
GCCGGGGCAA ATTATCTTAA CGCCGATGGC TGCAGCTATA TAGGTGCTGA TGCTTTCGCC 
ACCGATGCCT CAAAAGGGAT TGAAATATGT TTGGAATGGA TGAAAAGATG A
 
Protein sequence
MKDFGTTEEL LINYVEQLEE TKVFELANHA LDQGMNPLDL VNLIIEGMSR VGKRYEAKEY 
YIADLIMAGI IFRGVLELKP MTSYFSSHHK KKSGKVLLGT VKDDIHDIGK EIFRALLETH 
GFEVLDLGVD VSGETFVKKT REFKPDIIGL SGVLTSTIDQ MKQVIDILAA AGLKDQVRII 
AGANYLNADG CSYIGADAFA TDASKGIEIC LEWMKR