Gene Dhaf_3878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3878 
Symbol 
ID7260899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp4113265 
End bp4113975 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content52% 
IMG OID643563802 
ProductVitamin B12 dependent methionine synthase activation region 
Protein accessionYP_002460330 
Protein GI219669895 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAAG CAGGAACCTT GGCGGTTTTG GTGCCGGAGA TAACCATAGA AGAGCTGTTT 
ACGGCTCAGG GAGCGGATCT GAGCCGCCGC TCACCGAGAC AGGACATGGT GGATTTAAAC 
ATCAAGCTAT TGGCGGAAGC CAGGGAATTG GCAAAGGTCA GCATCATTTG GCAGGAAGTC 
AAAGTGCTGG GTTCGCAGCA GCAGGAGCTC TATCTTGAGG GTGGGCTTAC CTTAAGGGGC 
AGCTTATTGC CCAAGGTGTT AGGCCCGGCA GAGAGTGCGG TTTTGTTTGC GATGACCATC 
GGGGAAGGGA TCGATGAACG AGTCAAGGAA TACACCCATC AAGGCAAAAC CCTGGAAGCC 
TTCATCCTTG ATGCGGCCGG ATCGGCGATT TTGGCCAAAG CGGCCTATCA TGCTATCTCC 
GAACTCGCAG GACTCTATAA AGAAAAGCAG CTGGATACCA CGTTTTCTTT AGGTCCCGGG 
CATTCTTACT GGAAAGGGCT CGAAGATGTA AGAACGATCA TTGACTACCT GAAAGGGGAG 
CAGATCGGCA TCAGCCTGAC CGACTCCAAC CTTATGCTGC CCAAAAAATC CATTGCCATG 
GTCATGGGAG TGGGCAGCAA CTTACCGGAC TTCAAAGGTA AAACCCATTG TGACTTTTGC 
CATCTTAAGG GCAGCTGCAC GATGCGGGAG CTTGGCGTCA ATAATTGCTG A
 
Protein sequence
MAEAGTLAVL VPEITIEELF TAQGADLSRR SPRQDMVDLN IKLLAEAREL AKVSIIWQEV 
KVLGSQQQEL YLEGGLTLRG SLLPKVLGPA ESAVLFAMTI GEGIDERVKE YTHQGKTLEA 
FILDAAGSAI LAKAAYHAIS ELAGLYKEKQ LDTTFSLGPG HSYWKGLEDV RTIIDYLKGE 
QIGISLTDSN LMLPKKSIAM VMGVGSNLPD FKGKTHCDFC HLKGSCTMRE LGVNNC