Gene Dhaf_3856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3856 
Symbol 
ID7260877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4097164 
End bp4098408 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content49% 
IMG OID643563780 
Producturacil-xanthine permease 
Protein accessionYP_002460308 
Protein GI219669873 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2233] Xanthine/uracil permeases 
TIGRFAM ID[TIGR00801] uracil-xanthine permease 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000401696 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAGAG AAGTTCAGAT TCATGAAAGA CTCTCTCTTG CCCAAACGAT ACCCCTGGGA 
TTACAGCATG TTTTCGCTAT GTTCGGAGCC ACGGTACTGG TTCCTTTTCT CACCGGATTA
AGTCCCGCCG TCGCTCTTCT CTCCTCAGGG ATTGGCACCA TCGTTTTTCT TCTCTTAACT
AAAAGTCAAA TCCCGGCTTA TCTCGGCTCA TCCTTTGCTT ACATTGCCTC CTTGACTTAT
TTTGTTAAGG ATCAAAACAA TTTAGCCGCG GCTATGGGCG GCGCACTGGT CATCGGCATT
ATTTATGTCC TTCTTTTCGC TCTCATGAGT TACTTCGGAA GTTCCTGGAT TCATAAAATT
GTTCCTCCGG TCGTAGCCGG TCCTGTCGTG GCCATTATCG GCTTAAGCCT CACACCTACC
GCTGCCGGAA TGGCTTCCGA GCAATGGTAT ATCGCTATCT TCACCTTGGC TGTTACCGCT
TTCCTCAGTA TCTATGCCAA GGGCTTCTTA AAAATCATTC CCATTCTTGC CGGGATTGTC
ATCGGTTATA TTGTCGCCGC CTTCGCCGGT CTGGTGGATT TCACCGCAGT AACGGCTTCT
GTTTCTGTGG ATTCTTGGGA CAAGATTATC GTCTCCCCTA TCAACGCCGA CACTTGGCAG
GCACCAGTCT TTAATAAAGC TGCTATCCTG ATGTTCGCAC CTTTGGCCTT TGTCACCATT
ATTGAAGATT TAGGCCATAT GATTGTTCTG GGAAATATCA CCCATTCCGA CCCCATCGAG
AAGCCAGGAT TTAACCGGGT CTTGCTGGGC AATGGTCTCG CCACCGGAAT CGCCAGTTTC
TTAGGAGGCC CTCCGGTGAC CACTTACGGT GAAAACATCG GCGTACTGGC AGTTACTCGG
GTTTACAGCA CCTTCAATAT CTGGGTAGCA GCTTTTATCG CCATTATCCT CAGTTTCGTC
AATCCCCTGC AAGCTCTGAT TATGTCCATC CCCACAGCGG TTATGGGTGG AGTATCCCTC
TATCTCTTCG GTATGATTGG GGTCACCGGT CTGCGCACTT TGATTGAAGC GCGAGTAGAT
TTCTCCAAGA ACAAAAACCT GATTATCGCC TCTGTCATCT TTGCCGTAGG AATCGGCGTC
CAAAGCCATG GTGTCGCTTA TGCCACCTTG GCAGGGATTA TCCTCAACCT GGTTCTCCGG
GAAGAGAAGG ATGAAGTAGC CGGAAGTGGC AAAGAAGTAT CCTAA
 
Protein sequence
MIREVQIHER LSLAQTIPLG LQHVFAMFGA TVLVPFLTGL SPAVALLSSG IGTIVFLLLT 
KSQIPAYLGS SFAYIASLTY FVKDQNNLAA AMGGALVIGI IYVLLFALMS YFGSSWIHKI
VPPVVAGPVV AIIGLSLTPT AAGMASEQWY IAIFTLAVTA FLSIYAKGFL KIIPILAGIV
IGYIVAAFAG LVDFTAVTAS VSVDSWDKII VSPINADTWQ APVFNKAAIL MFAPLAFVTI
IEDLGHMIVL GNITHSDPIE KPGFNRVLLG NGLATGIASF LGGPPVTTYG ENIGVLAVTR
VYSTFNIWVA AFIAIILSFV NPLQALIMSI PTAVMGGVSL YLFGMIGVTG LRTLIEARVD
FSKNKNLIIA SVIFAVGIGV QSHGVAYATL AGIILNLVLR EEKDEVAGSG KEVS