Gene Dhaf_3836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3836 
Symbol 
ID7260857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4075373 
End bp4076044 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content54% 
IMG OID643563760 
ProductL-serine dehydratase, iron-sulfur-dependent, beta subunit 
Protein accessionYP_002460288 
Protein GI219669853 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1760] L-serine deaminase 
TIGRFAM ID[TIGR00719] L-serine dehydratase, iron-sulfur-dependent, beta subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0141316 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACGGA GTACCGTTTT TGATTTAATC GGCCCGGTTA TGGTCGGCCC TTCCAGTTCA 
CACACCGCAG GGGCCGTACG GCTGGGGGCT ATGGCCCGAA AGATATGCGG CGGGCAGATC
GTTGAGGCTG TGTTAACCCT TCATGGCTCC TTTGCCGAGA CGGGCAAAGG CCACGGGACG
AATCTTGCTT TAGCGGCAGG ATTATTAGGA ATGCATACCG ATGACGAGAG GATTCCTCAA
GCCCTGGCGA TGGCCGAAGA GCAGGGAATC GCCATAAAAT TTAGAAGCGG GGACTTGGGG
GATGTCCATC CCAATACCGT CAAGATCAAG TTGAAAGCCA AGGAAGGGCA AGAGGTGGAA
GTAGTGGGTT CTTCCATCGG CGGGGGCCGC ATCATCATTG GCGGCATTGA TCAATTTAAG
GTAGAGATCA TGGGAGATTA CCATACTTTA GTGGTTCTGC AGAATGATCT GCCCGGTGTG
GTGGCCCAAG TCAGCTCTCT GATCGCCGCC ACCCAGATCA ATATCGCTCA GATGAGGGTT
TCCAGGGAGA AAAAAGGAGC CCATGCGCTG ATGATTATCG AGACGGATCA AGCCATCGAT
CCGGCCGCCT TAGCTTTGAT CAAAAAGCTC CCGGCAGTGA ATCAGGCTAT GGCCATAGAA
CCCTTGGATT GA
 
Protein sequence
MGRSTVFDLI GPVMVGPSSS HTAGAVRLGA MARKICGGQI VEAVLTLHGS FAETGKGHGT 
NLALAAGLLG MHTDDERIPQ ALAMAEEQGI AIKFRSGDLG DVHPNTVKIK LKAKEGQEVE
VVGSSIGGGR IIIGGIDQFK VEIMGDYHTL VVLQNDLPGV VAQVSSLIAA TQINIAQMRV
SREKKGAHAL MIIETDQAID PAALALIKKL PAVNQAMAIE PLD