Gene Dhaf_3702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3702 
Symbol 
ID7260723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3934553 
End bp3935698 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content50% 
IMG OID643563626 
Product1-deoxy-D-xylulose 5-phosphate reductoisomerase 
Protein accessionYP_002460154 
Protein GI219669719 
COG category[I] Lipid transport and metabolism 
COG ID[COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 
TIGRFAM ID[TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000227105 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGAGAT TGACAATTTT AGGCTCTACG GGGTCTATCG GCACCCAGAC ATTGGATATT 
GTGCGTCAAA ATCCGGAACA GTTAGAGGTT TTTGCTTTAG CGGCAGGGAA GAATGTCCAG
GAAATTGAAC TTCAGGCCCG GGAATTTAAG CCTCAGATCA TCGGGTTGAT GGAGGAAAAG
GCTGCCCGGG AATTAAAACA ACGGGTGGCG GATCTGGATA TTGAAGTGGT TTCCGGGATG
GAGGGGCTCC TGCGCACCGT TACGGATGAG GTGCCGGATA CGGTGGTAAC GGCCATCAGC
GGGCGCATTG GTTTGGAGCC GACCATGGAG GCCTTGAAGG CGGGAAAAGA CATCGCCTTA
GCCAATAAGG AAACCTTGGT TGCCGGCGGC GATTTGGTGA TGGGAACAGC CCAAAGGCTG
GGCAGAACCA TTCTTCCCGT GGATAGTGAA CACTCGGCCA TCTTCCAATG CTTAGAAGAA
GATCCGCGTA CCCTGGACAA GATCATCCTG ACGGCTTCCG GCGGTCCATT CCGGGGGTGG
TCTGAAGAAC AATTGAGGGA GGTCACTCCG GAAAGAGCTC TGCAGCATCC TAATTGGGCG
ATGGGAGCAA AGATAACCAT TGACTCCGCC ACCATGATGA ATAAAGGCCT GGAAGTTATT
GAGGCTCATC ACCTCTTCAA TATGGAGTAT GATCAGATTG ACGTCTTGAT CCATCCGCAA
AGTGTGATTC ATTCTATGGT TCAATACTGT GATGGGAGTG TTCTGGCACA ATGTGGAAGA
CCGGATATGC GTTTGCCTAT CCAGTATGCC TTAACTTATC CGACCCGCTG GCCTAACCCC
TTTGAACGAC TGGATTTACG GGGAAAGACC TTAAGCTTTT TTGACCCGGA GGATTATGAT
TTCCCTGCCT TGAAGCTTGC TTACGCTTGT GGAAAACGGG GAGGTACGTT GCCGGCTGTG
ATGAATGCCG CCAATGAAGT TGCGGTTCAT GCCTTTTTAG CACGCAGGGT AGCTTATCTG
GAAATTATCG GCTTGGTGGA TAAGGTTTGC TCGGAACATG ATGTGTTAGA TGCCACAGAT
TTGGAAACCA TACTTAATGC GGATCATTGG GCTCGTATCC GTACGGAAGA GCTTATCCAT
AGCTAG
 
Protein sequence
MKRLTILGST GSIGTQTLDI VRQNPEQLEV FALAAGKNVQ EIELQAREFK PQIIGLMEEK 
AARELKQRVA DLDIEVVSGM EGLLRTVTDE VPDTVVTAIS GRIGLEPTME ALKAGKDIAL
ANKETLVAGG DLVMGTAQRL GRTILPVDSE HSAIFQCLEE DPRTLDKIIL TASGGPFRGW
SEEQLREVTP ERALQHPNWA MGAKITIDSA TMMNKGLEVI EAHHLFNMEY DQIDVLIHPQ
SVIHSMVQYC DGSVLAQCGR PDMRLPIQYA LTYPTRWPNP FERLDLRGKT LSFFDPEDYD
FPALKLAYAC GKRGGTLPAV MNAANEVAVH AFLARRVAYL EIIGLVDKVC SEHDVLDATD
LETILNADHW ARIRTEELIH S