| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3676 |
|---|
| Symbol | |
|---|
| ID | 7260697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 3910096 |
|---|
| End bp | 3913011 |
|---|
| Gene Length | 2916 bp |
|---|
| Protein Length | 971 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643563601 |
|---|
| Product | translation initiation factor IF-2 |
|---|
| Protein accession | YP_002460129 |
|---|
| Protein GI | 219669694 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.156109 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGTATAC GTGTTCATGA ATTAGCCAAG GAATTAAATT TAAGCAGCAA AGAAGTGATG
AGTCGCCTGG AAAGTATAGG TGTCGATGTA AAGAACCATT TGAGTGCCGT CGAAGATCAG
GATGCCAATC GTCTTCGGAC TCGAATTCAG AAACCGCAGG GTAAAGAACA AGCCGTAGAA
CCTAGGAAAA GCGTTCCGTC CCAGGAAAGC AAGAACTTAA CGCAAGGGCC GGCTGAAGGG
AATCGTGACA AATCTCAAGG TTTGCAAGTG GAAAGTTCCC GAGTAGAAGG AGAAGGACGT
CCTCAAGGGC AGAGACCAAT GGGAGATCGT CCTCAGGGGC AAAGACCAAT GGGAGATCGT
CCTCAGGGGC AAAGACCCAT GGGAGATCGT CCTCAAGGGC AGAGACCGAT GGGAGATCGT
CCTCAAGGGC AAAGACCAAT GGGAGATCGT CCCCAAGGGC AGAGACCGAT GGGAGATCGC
CCTCAAGGGC AGAGACCGAT GGGAGATCGT CCTCAGGGGC AAAGACCAAT GGGAGATCGT
CCTCAAGGGC AAAGACCAAT GGGAGATCGT CCTCAGGGGC AGAGACCGAT GGGAGATCGT
CCTCAAGGGC AAAGACCAAT GGGAGATCGT CCTCAGGGGC AAAGACCAAT GGGAGATCGT
CCTCAGGGGC AAAGACCCAT GGGAGATCGT CCTCAAGGGC AGAGACCGAT GGGAGATCGT
CCTCAAGGGC AAAGACCAAT GGGAGATCGT CCCCAAGGGC AGAGACCGAT GGGAGATCGC
CCTCAAGGGC AGAGACCGAT GGGAGATCGT CCTCAGGGGC AAAGACCAAT GGGAGATCGT
CCTCAAGGGC AAAGACCAAT GGGAGATCGT CCTCAGGGGC AGAGACCGAT GGGAGATCGT
CCTCAAGGGC AAAGACCAAT GGGAGATCGT CCCCAAGGGC AGAGACCGAT GGGAGACCGT
CCCCAGGGAC AAAGACCACC TCAGAGACCC CCTGCAACTC CTGGTACACC AGCTGTAGAG
CAACCGCCTA AGCGTCAAAT CGGTGAAAAG AAGAAGCCAC AAGACCGGAA TTTTGAACGC
AAAAAAGAGA TGGAAAAAGA GATACGCGCA CCACGAGGCA ACAGACGCAA TGTGAAGGCA
GCACCACGGG AGATTCGTGA TACAGCCCCC AAGCATATCG TTATTCCGGA GAGCCTGACG
GTTCAGGATT TGGCAGCCAA AATGAGTCGC AAATCCGGAG AAGTTATCAA GAAACTGATG
GATATGGGTG TCATGGCCAC CATCAATCAA GAGATTGATT CGGAAACTGC CGTCATTATT
GCGGGAGAAA TGGGAGTTAC AGTGGAGGTT AAGATCGAAA AGCCCATCAC TGTGATTGAA
GAGATTGAGG ACGATCCTGC TGAACTGCGG TCACGTCCAC CCGTTGTCAC TGTCATGGGG
CATGTTGACC ATGGTAAAAC ATCACTCCTT GATGCCATAC GGACGACTAA AGTCACTGCA
TCGGAAGCAG GGGGTATCAC TCAGCATATT GGTGCTTATC AGGTAGAGAT CAATGGACAG
AAGATTACCT TCCTTGATAC CCCGGGCCAT GAAGCGTTTA CCGCTATGCG CGCTCGCGGG
GCTCAAGTCA CGGATATTGC CATTCTTGTG GTGGCTGCAG ATGATGGTGT GATGCCCCAA
ACTGTTGAGG CGATCAACCA TGCCAAAGCT GCCGATGTGC CGATCATTGT CGCCATCAAC
AAGATTGATA AAGAAGAGTC TAACCCGGAT CGGGTTAAGC AGGAATTGAC CGAGTATGGA
CTGGTGGTTG AAGAATGGGG AGGAGACACC ATCGCGGTGC CTGTTTCAGC CAAAGCCCGC
ATGAATATTG AACAGCTCTT GGAGATGGTT CTGCTTGTCG CGGAAATCAA AGAGCTGAAG
GCCAACCCCA ATCGCAGTGC CACCGGAACA GTGATTGAAG CTGAATTGGA TAAAGGAAAG
GGACCTGTGG CGACAGTTCT CGTCTCTAAA GGAACCTTAA ATGTTGGCGA TATTATTCTC
GCCGGATCCT CCTTTGGCCG CATTCGTGCC ATGGTGGATG ACAAAGGACG CCGTGTTAAA
AAAGCCGGTC CTTCCACTCC TGTCGAGGTT CAGGGGCTCA ATGAGGTTCC CAAAGCCGGT
CAAGTCTTCA ATGTTGTTGA CGATGAGAAA CATGCCCGCC AGATTGCCGA AGCACGTGCT
AACGAGCGGA AGGCTGAAGA AGTGCGGCAG ACGACTAAAG TCAGCTTAGA GGACCTTTTC
GATCGGATTA AAGAAGGGGA AGTCAAAGAG CTGAATGTGA TCATCAAGGC TGACGTTCAG
GGCTCTATCG AGGCTCTGAA GCAATCACTG CTTCGTTTAT CCACCAGTGA AGTCAGGGTC
AACCCGATTC ATGGAGGGGT TGGAGCCATT ACAGAGACAG ACATCATGCT TGCCGCGGCT
TCCAATGCTA TCATCATTGG CTTTAACGTC CGCCCCGACG CCAATACCAA AGCAACAGCA
GAGCTGCAAG GAGTAGATAT GCGCCTCTAT CGGGTCATCT ATGATGCGAT TGAGGATGTT
AAGGCTGCTA TGACAGGTAT GCTGGATCCT GATTTTAAAG AAGTGGTACA AGGCCGGGCT
GAAGTTCGCC AAGTCTTTAA AGTTCCCAAA GTTGGAACTG TCGGCGGATC TTATGTGCTC
AACGGCAAGA TCACAAGGCA CTCCAAAATC CGCGTCATTC GTGATGGCAT AGTCATTCAT
GAAGGAGAGC TGGAATCCCT GAGACGTTTC AAGGACGATG CCAAAGAGGT TGTGGAAGGC
TACGAATGCG GTATTGGAGT AGCAAACTTC AATGATATTA AAGAGGGAGA CATTATAGAG
GCCTTTATCA TGGAAGAAGT GAAACGACAA CTATAA
|
|---|
| Protein sequence | MSIRVHELAK ELNLSSKEVM SRLESIGVDV KNHLSAVEDQ DANRLRTRIQ KPQGKEQAVE
PRKSVPSQES KNLTQGPAEG NRDKSQGLQV ESSRVEGEGR PQGQRPMGDR PQGQRPMGDR
PQGQRPMGDR PQGQRPMGDR PQGQRPMGDR PQGQRPMGDR PQGQRPMGDR PQGQRPMGDR
PQGQRPMGDR PQGQRPMGDR PQGQRPMGDR PQGQRPMGDR PQGQRPMGDR PQGQRPMGDR
PQGQRPMGDR PQGQRPMGDR PQGQRPMGDR PQGQRPMGDR PQGQRPMGDR PQGQRPMGDR
PQGQRPMGDR PQGQRPMGDR PQGQRPPQRP PATPGTPAVE QPPKRQIGEK KKPQDRNFER
KKEMEKEIRA PRGNRRNVKA APREIRDTAP KHIVIPESLT VQDLAAKMSR KSGEVIKKLM
DMGVMATINQ EIDSETAVII AGEMGVTVEV KIEKPITVIE EIEDDPAELR SRPPVVTVMG
HVDHGKTSLL DAIRTTKVTA SEAGGITQHI GAYQVEINGQ KITFLDTPGH EAFTAMRARG
AQVTDIAILV VAADDGVMPQ TVEAINHAKA ADVPIIVAIN KIDKEESNPD RVKQELTEYG
LVVEEWGGDT IAVPVSAKAR MNIEQLLEMV LLVAEIKELK ANPNRSATGT VIEAELDKGK
GPVATVLVSK GTLNVGDIIL AGSSFGRIRA MVDDKGRRVK KAGPSTPVEV QGLNEVPKAG
QVFNVVDDEK HARQIAEARA NERKAEEVRQ TTKVSLEDLF DRIKEGEVKE LNVIIKADVQ
GSIEALKQSL LRLSTSEVRV NPIHGGVGAI TETDIMLAAA SNAIIIGFNV RPDANTKATA
ELQGVDMRLY RVIYDAIEDV KAAMTGMLDP DFKEVVQGRA EVRQVFKVPK VGTVGGSYVL
NGKITRHSKI RVIRDGIVIH EGELESLRRF KDDAKEVVEG YECGIGVANF NDIKEGDIIE
AFIMEEVKRQ L
|
|---|
| |