Gene Dhaf_3643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3643 
Symbol 
ID7260661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3867996 
End bp3868754 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content45% 
IMG OID643563565 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002460096 
Protein GI219669661 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000799696 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGAGC GGATCATTCG AAAAATTCAT GGTTTGGTTT TTCCTGCCTT ACTGATTATA 
CTATGGCAAG GCGTTAGTTA TTTTGGCTGG GTTAACCCCT ACCTTTTGCC TTCACCGGGT
GATATTATAG GGGCATTTAC GGAACTTTTA TTCACAGGGG AGATTTTTAC CCATATCAAA
TCTAGCCTTT TCAGACTGGG AGTGGGGATG GCAATTACCA TAGGGCTTGC CGTTCCCCTC
GGTTTGTTCA TTGGACTTTT TAGCCGGGCG CAGAAGTTTA TCACTCCCAC CTTAGCATTC
TTGCAGCAAA TCCCCACGAT TGCCTGGATT CCTGTCTTTA TTCTTTGGCT GGGCATTGGC
GAGGCAATGA AGATTGCGCT GATGGTCTAC GCAGCGTTTT TTCCTGTCTT TATTAACACA
TTATTTGGCA TTCAATCCGT AGATCAGAAA TTAAAAGAGG TGGCCCAGGC TTTCAGTTTA
GGTTACCAGG CAAGGATTAC TCATGTTTAT CTCCCTTCGG CAGCGCCCCA TTTTTTTGTG
GGCATACGCT TAGGCTTCAG CAACTGTTGG CGGGCCCTGG TAGCTGCCGA AATTATTGCT
TCTTCAAAGG GATTAGGCTA TCTGTTGATG GAGGGTAGAA ATCTAGCCCA GGCGGAGTTA
ATTTTTGTTT CGATTTTTAT CATCGGCAGC CTTGGTGCAT TGATTGACTA CGGGATTAAG
TACCTTGAAC AAAGAGCATT ACCTTGGCAT AAGGCATGA
 
Protein sequence
MNERIIRKIH GLVFPALLII LWQGVSYFGW VNPYLLPSPG DIIGAFTELL FTGEIFTHIK 
SSLFRLGVGM AITIGLAVPL GLFIGLFSRA QKFITPTLAF LQQIPTIAWI PVFILWLGIG
EAMKIALMVY AAFFPVFINT LFGIQSVDQK LKEVAQAFSL GYQARITHVY LPSAAPHFFV
GIRLGFSNCW RALVAAEIIA SSKGLGYLLM EGRNLAQAEL IFVSIFIIGS LGALIDYGIK
YLEQRALPWH KA