Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_3611 |
Symbol | |
ID | 7260629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 3834977 |
End bp | 3837382 |
Gene Length | 2406 bp |
Protein Length | 801 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643563533 |
Product | single-stranded-DNA-specific exonuclease RecJ |
Protein accession | YP_002460064 |
Protein GI | 219669629 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000975309 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCAAAA GAATATGGAC AAAACCACAA CCCCTTCCTG GGTTTAAAGA TAGTAGAAGC CCGCTCCCCC AACGATTAGG GATTACTCCG GTAGTGGCAG ACATTCTCAG GCAGCGGGGC ATCGAGGCAG AGGAGGAAAT CATGGAATTT CTCAGACCTT CTTTGCTTAA TTTAAATTCT CCGTTTGCCT TTCGAGAAAT GGCTAGGGCT ATTGAGCGTT TAGAGCTGGC ACGGGCTCAA GAAGAAAAAA TCCTTATCTA CGGCGATTAT GACGTTGATG GGGTAACCAG CACGGCTTTG CTCTATAAAG TATTGACAGA TTTGGGGTTT AAGGCGGTCG CCTATATTCC CAGCAGGATG GACGAAGGCT ATGGCTTACA TAAGGATGCT ATAACAAAAG CTTTGCAAGC CAATGTGAAG GTGATGATCA CTGTGGATTG TGGCATTACC GCCGTGGAGG AAGTGGAGTA TGCTCGGTCT CAGGGGATAG ATATTATCCT TACCGACCAT CATGAGCCGC CGGATAGTCT GCCTCAAGCT TATGCCATTC TGAATCCCAA GGTTAAGGAT TCAGGATATC CTTTTCGGGA CTTAGCCGGA GTAGGAGTAG CGTTTAAGCT GGCTCAGGCC TTGTTGGAGA GGTTAGAAGA GGGAAAATCA GGTGCTTATG CGGTCCTGGA AATCTTAGAT TTAGCAGCTT TAGGTACCAT TGCTGATCTT GTCCCCTTAA CCCATGAGAA CCGCATCATT GTGGCCTATG GCTTACGCCA GATGGAGAAT ACCATTCATC TGGGACTGCG TACTCTTCTT GAGGAGTGCG GTCTGTGGGG AAAACCGCTT AAAGCCGGGC AAATCGCCTT CATGGTGGCG CCGCGTATTA ATGCTGCAGG CCGCATGGAC AGTGCCCGGG CCGGATTGGA GCTGTTGCTC ACAGGTCATG AAGAACGGGC TGTTGAGCTG GCACGGTTTT TGAGCCGGGA GAATACCTTG CGCCAGGACA CCGAAAAGGA AATCTTTGCT GAAGCGGTGG AGATTTTGGA GAAAAACCCT ATGCCACGGG TGATTGTTTT ATCAGGAAAG AACTGGCATC ATGGGGTCAT CGGCATCGTG GCCTCCCGCT TGGTGGAGCG CTACTATCGC CCGGTTTTCC TTATTGCTGA GGAAGAGGAG ATTGGGAAAG GGTCCGCCAG AGGGATTGGG GGCTATCATG TATTGGATGA GCTCAAGGCT CAAGCAGAGT TGTTGGAGAA ATTCGGCGGA CATAGTCAGG CCGCCGGCTT CTCGTTAAAA CTGGAAACTA TCCCCCTGCT TCGGGAGGCT TTGAATCAGG CGGCCTTACA CCTTCCTGAG GAGATGTTCT ATGAACGGAT TCGTGTGGAC CAATGCGTCC CTTTGGAAGT TCTTGATGCC TCTTTGCTGC ATGATTTGGA ACATCTGGCC CCTTTTGGAT TTGGCAACCC CAGCCCGGTG CTGGCCGGAA GGGATTATCC CCTCTATATG GCCGACACGG TGGGCAAAGA CCATGCTCAT TTAAAGTGTA TGTTCGGACC CCAAGGGGAA TGGGAAGGAA TAGCCTTTCG CAAAGGGGAA GAGTTAGCCA ATATTTTGGG TTCGGCAACG GTGGATGTTG CTTTTGGTTT GGATTGGAAT ACCTTTCGTG GCGCCCAGAG TATTCAGCTG ATGATCAAAG ATATTCAGCC CCAAGCCTCA TGGCAGGAGG AGCATGACCG ATTCCTGGCC GGGCAGGAGA TTGCCTTGGG TCAGGAGGAA ACGGCTGCAA GTGGCCTATA TCCTCAAGAA CTGGAAATTA TGGATTGGCG AAGCAAAAAT CGGGAAGAAT GGAGCAAAAC CCTGGAAAGC CGGGGGGACT CCGTTGCTCT TTGGGATTTT ACCGGGATAA GCCCTCAAGG GCCAGACGCA GATCACCGGG CACCATGGGC TGTAGTCATA GGGGTTCCTC CATCGTGGCA AAGGGTTGCG GATATGATCA GGCAGGTCCG GAACAGCGGT GGACAAGGAG TGATCCTGGC TGAAAGTCAG ATTGATCCGC TGGTTCTGAA GGAGCGAACG GGTTATTTAG CGCGGGAAGA TCTTGTCCAA ATGTACAGAG TATTATATGA TTTGGCTATT AAGAATAATC CGTTTACCTG GGTGGCAGAG GAAATTCCCC TATGGCAAGC ACAGGCTGGA TTAAAGATCT TCGAAGAATT GAATTTGTTC CGCTGTCTGC GCTATAGCTC CGATACCATC CATATCGAGT GGATCCCGGC CCAAAAGAAG CTGGACCTGG AAGGAGCGCT GCGTTTTCGC GGGGCCAAAA GCCGCTGGGA GGAAGCCATG GCGTTTAAAG AAGAATATTG TACGATGCCG TGGCCGGAGT TTAAGAAAAG GCTGGGCCGG TACTAA
|
Protein sequence | MTKRIWTKPQ PLPGFKDSRS PLPQRLGITP VVADILRQRG IEAEEEIMEF LRPSLLNLNS PFAFREMARA IERLELARAQ EEKILIYGDY DVDGVTSTAL LYKVLTDLGF KAVAYIPSRM DEGYGLHKDA ITKALQANVK VMITVDCGIT AVEEVEYARS QGIDIILTDH HEPPDSLPQA YAILNPKVKD SGYPFRDLAG VGVAFKLAQA LLERLEEGKS GAYAVLEILD LAALGTIADL VPLTHENRII VAYGLRQMEN TIHLGLRTLL EECGLWGKPL KAGQIAFMVA PRINAAGRMD SARAGLELLL TGHEERAVEL ARFLSRENTL RQDTEKEIFA EAVEILEKNP MPRVIVLSGK NWHHGVIGIV ASRLVERYYR PVFLIAEEEE IGKGSARGIG GYHVLDELKA QAELLEKFGG HSQAAGFSLK LETIPLLREA LNQAALHLPE EMFYERIRVD QCVPLEVLDA SLLHDLEHLA PFGFGNPSPV LAGRDYPLYM ADTVGKDHAH LKCMFGPQGE WEGIAFRKGE ELANILGSAT VDVAFGLDWN TFRGAQSIQL MIKDIQPQAS WQEEHDRFLA GQEIALGQEE TAASGLYPQE LEIMDWRSKN REEWSKTLES RGDSVALWDF TGISPQGPDA DHRAPWAVVI GVPPSWQRVA DMIRQVRNSG GQGVILAESQ IDPLVLKERT GYLAREDLVQ MYRVLYDLAI KNNPFTWVAE EIPLWQAQAG LKIFEELNLF RCLRYSSDTI HIEWIPAQKK LDLEGALRFR GAKSRWEEAM AFKEEYCTMP WPEFKKRLGR Y
|
| |