| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3593 |
|---|
| Symbol | |
|---|
| ID | 7260611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 3815370 |
|---|
| End bp | 3816050 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643563515 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_002460046 |
|---|
| Protein GI | 219669611 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00000142937 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAGA TCCTTTTGGT GGAGGACGAT CTGCAGTTAC AAGAGATCAT TGAGGATTAT
TTCACCGCCA AAAGTGCCGG TGAAATCGAA ATGGTCTGTG CGGCCAACGG AGCCGATGGG
TTGGAGAGCG CTCAGGAAAA GGACTATGAC CTGGTGCTGC TGGATGTGAT GCTGCCGGAA
GTGGATGGTT TCACTATCTG CCGGGAACTC AGGCGTCACA GCGATGTCCC CATAATGTTC
CTGACGGCCC GCCAGGCGGA AGGGGACAGA CTTCACGGTT ACGGCCTTGG GTGTGACGAC
TACATGATAA AACCCTTTTC CCTGGCGGAA CTCTATGCCA AAGCCAACTC TTTGGTTCGG
CGGGCCAAGG GTATGGTACG GGATGACCTG ATGAGCGTGG GGGGAATCAG CCTCGATCCT
TACAGGGGCA CCGTTTCGGT GGACGGAAGA GTGGTGGAGC TGGCCCCGAA AGAATACGCC
CTCTTAAAAT TGCTGATGGA GAATGCCGGA AAAATCGTCA CCCGGGAGAC CCTGCTGGCG
AGGATCTGGG GCTATGATTT TTCCGGGAAT GACCGGGTGG TGGATAACCA TATCAAAAAG
CTCCGGCAGA CGCTGGGAAA AGGGGCGGAA CAGATTAAAA CCGTGGTGAA AAGCGGCTAC
CGTCTGGAGG AGAGAAAATG A
|
|---|
| Protein sequence | MIKILLVEDD LQLQEIIEDY FTAKSAGEIE MVCAANGADG LESAQEKDYD LVLLDVMLPE
VDGFTICREL RRHSDVPIMF LTARQAEGDR LHGYGLGCDD YMIKPFSLAE LYAKANSLVR
RAKGMVRDDL MSVGGISLDP YRGTVSVDGR VVELAPKEYA LLKLLMENAG KIVTRETLLA
RIWGYDFSGN DRVVDNHIKK LRQTLGKGAE QIKTVVKSGY RLEERK
|
|---|
| |