Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_3568 |
Symbol | |
ID | 7260586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 3794609 |
End bp | 3795853 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643563491 |
Product | transposase IS4 family protein |
Protein accession | YP_002460022 |
Protein GI | 219669587 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3385] FOG: Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGACA AGGATACTAC GCATTCCACA TTTATGCAAG CCTTTCAGCC GCTTTTTTCA AAAGATTTAT GGAAAGATAT CCATCAGCAG GTCCCAGACC TCGATCGCAG GACCCAAAAA CTAAAGACAA ATCAACTCAC TCTCCTCATT AGTAACGCAC AACTTCAAGA ATACAGAGCT TTACGAAAGA TCAGTACGAG CGTTCTAAGT GACAATCTTG GTCAAGCCAT CGGTTTAAAG AGCATTAGTC ACAGTCAGAT TTCTCGAAGG TTAAAGACTT TGCCTACTAA GGTTTCGGAA ATGCTCTTTA GGCGCACTTT ACACAAAGTA GCTCAAAAGC AAGGGTATGG GAAGATTCGG CAGCAACTCG GTAAATTGTA CATGATTGAC GCATCGACTA TCAGCCTATG CCTTTCCCGT TATCCCTGGG CCGTGTTCAG AAAGAGCAAA GCCGGTGTAA AAATACATCT ACGCTTAAGC TTTGATGGAA TAGCTCTACC CGATGAAGTG GTCATTACCC CAGCCAAAAT AGCCGATCGC AAGAAGCTGG ATGAACTTAT TGTTGAAGAT AAGGATGCCC TCAATATTTT TGATCGAGGT TATGTGGACT ACGAGCTATT TGATGATTAC TGCGAAAAAG GGATACGCTT TGTTACTCGT CTCAAAAACA ACGCAATCAT GGAGTTTACA GGCGTTGAGC GTCCCGTAGA AGAAGATGGG ATTATCGAGG AAGACGTGGA TATCATCCTA GGAACAGGTT CCCGAAAAAT GAAGCATACC CTCCGGGAAG TGACCATAGA TGATACCATC AACGAACCCT TTACGATCTT GACCAATGAT TTTGAACTAA GTGCCGAAGA ACTGGGTGAG ATCTATCGTT ATCGCTGGCA GATTGAATTG TTCTTTAAAT GGCTCAAGCA GCACGCTCAA ATTAAACACT TTTACGGTAC AAGCGAAACC GCAGTAACCA ACCAAATTCT ATTAGCACTG ATGACTTATT GTTCTTTAAT GCTGCTTAAA CTTGAAGTGG AATATCCAAG AGACTTGCTC ACCTTGCAAA GACTACTGAT TACCTGTCTC TTTGAGAGCT ATGAGGAGTT TTTAGAAAAA CTCCGACGAC GAAGAAGGAA AGCTGCCAAA AGGATTAACC ATGAAAAGAT CTACCAAATG ACAGAGCATT ACATCATCAC TGAGGAAGAC ACAGGATGGT TAAATGACTT GATATATGAC CCTGTGATTC TGTGA
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Protein sequence | MQDKDTTHST FMQAFQPLFS KDLWKDIHQQ VPDLDRRTQK LKTNQLTLLI SNAQLQEYRA LRKISTSVLS DNLGQAIGLK SISHSQISRR LKTLPTKVSE MLFRRTLHKV AQKQGYGKIR QQLGKLYMID ASTISLCLSR YPWAVFRKSK AGVKIHLRLS FDGIALPDEV VITPAKIADR KKLDELIVED KDALNIFDRG YVDYELFDDY CEKGIRFVTR LKNNAIMEFT GVERPVEEDG IIEEDVDIIL GTGSRKMKHT LREVTIDDTI NEPFTILTND FELSAEELGE IYRYRWQIEL FFKWLKQHAQ IKHFYGTSET AVTNQILLAL MTYCSLMLLK LEVEYPRDLL TLQRLLITCL FESYEEFLEK LRRRRRKAAK RINHEKIYQM TEHYIITEED TGWLNDLIYD PVIL
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