Gene Dhaf_3542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3542 
Symbol 
ID7260560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp3767050 
End bp3767523 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content40% 
IMG OID643563465 
Producttranscriptional regulator, AsnC family 
Protein accessionYP_002459996 
Protein GI219669561 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00000609578 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAATTA ATCTTGACAC TCAGGATAAA GCCATTATCC ATGCTTTGCA GGAAGATTCC 
TCTATCTCAA ATTTGGAACT ATCGAAGAAG ATTGGCTTAT CGCCCTCGGC CTGTTTAACA 
CGGACAAAAA ACTTAAAAGA ACAAGGGGTC ATTAAGCAAT ATACTGCCTT TGTCGATGAG 
AAAAAGCTGG GCGTTGAGTT AATTGCTTTC ACGATGGTGA ATCTTTCTCC TCTCAATAGA 
GAGATTGCCA ACCATTTTTT GGCGACGATT AATGAAATCC CTAATGTTCT CGAATGCTAT 
ACAGTGACGG GCAGCCGGGA TTTTCTTTTA AAAGTAGTGG CGAAGGACAT TGCTACTTTT 
CGGGATTTTA TCATCGACAC CATTATGGCT ATTCCGGGGG TGGATAAAGT AGAAACCAGT 
ATTGTCATGA ACAGGGATAA ATGCACGTTA ACCATACCTA TAGATCAAGA TTAG
 
Protein sequence
MEINLDTQDK AIIHALQEDS SISNLELSKK IGLSPSACLT RTKNLKEQGV IKQYTAFVDE 
KKLGVELIAF TMVNLSPLNR EIANHFLATI NEIPNVLECY TVTGSRDFLL KVVAKDIATF 
RDFIIDTIMA IPGVDKVETS IVMNRDKCTL TIPIDQD