Gene Dhaf_3521 details

Gene Information

• Locus tag: Dhaf_3521
• ID: 7260539
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: -
• Start bp: 3750111
• End bp: 3750668
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 643563444
• Product: Peptidoglycan-binding LysM
• Protein accession: YP_002459975
• Protein GI: 219669540

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.000000216778
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGAAGATT ATGTGATTCA ACCGGGAGAT ACCTTTTACC AGCTTGCCCA AAGATGGGGA 
GGAACCTGTG AGGAGTGGAG CCTGGCGAAT CCGGGCTTGA ACCCGGATTA TCTGCAGATC 
GGTCAAAAGG TTTACCTGCC CAGAACGGTG AATCCCGGGG GAAATGAGCA TTATGCCGTC 
ATTACACCAC AGCAGGGGGT AGGGTATGCG GGGGATCATC TTGATGAAGT GGAGATGGAA 
GTCGAGGGAG TAAAGTTCAG AATCAAACGG ATAGGGGAAA GCAGAATTCC TCATGAAATT 
CATCTCACCG TGCCGAGAAC CGAAATACGT AAGATTCAGC CTTGCGGTAT TTATGGTCCT 
AGCGAAGTAC AGATTATGTT AAGCAATGTT AATATCATTC ATTCTCCCCG CCTGATGAGC 
GACCGGCCTC GTATTGAAGC CCAGAATGGT GGTACAACCC AGGGCAATCA GGGGAATGCT 
CAGCAGAATA ATGCACCGGA GCTTTCTCAA GTCAGGGAGC TGTACTCCGA CGTGCGCCAG 
GATCGGCCTG TTTTTTAG 

 

Protein sequence

MEDYVIQPGD TFYQLAQRWG GTCEEWSLAN PGLNPDYLQI GQKVYLPRTV NPGGNEHYAV 
ITPQQGVGYA GDHLDEVEME VEGVKFRIKR IGESRIPHEI HLTVPRTEIR KIQPCGIYGP 
SEVQIMLSNV NIIHSPRLMS DRPRIEAQNG GTTQGNQGNA QQNNAPELSQ VRELYSDVRQ 
DRPVF