Gene Dhaf_3520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3520 
Symbol 
ID7260538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp3749482 
End bp3749919 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content47% 
IMG OID643563443 
Product3-dehydroquinate dehydratase 
Protein accessionYP_002459974 
Protein GI219669539 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000000000000267198 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAAGA TTTGGGTCCT TCATGGCCCT AATTTGAATT TGCTAGGACG GCGTGAACCG 
GACAAGTATG GGACTCAGAC TCTCGACGAA ATTAACAACG AACTTCTACA TAAGGCTTAT 
ACTGCAGGAA TCCCTATACA GGTGGAGCAG ACCAATTTCG AAGGGGAGTT AATTCAGTGG 
ATTCACAGTA TGGGACCGGA TGACTTTTTG ATTATTAATC CTGGAGCATG GACTCATTAC 
AGCTATGCTG TTCGGGATGC CATAACCAGC GTTCAGGTGC CGGCTATTGA GGTCCATTTA 
TCCAATATCC ATGCCCGGGA AGAATTCCGG AAAACCTCAG TCATTGCTCC TGTCTGCTGT 
GGGCAAATTT CCGGCTTAGG TGGAAAAAGC TATAGCTTAG CTTTGGATTA TGCCCTGGAG 
GCCTTGACAC AGAAGTGA
 
Protein sequence
MGKIWVLHGP NLNLLGRREP DKYGTQTLDE INNELLHKAY TAGIPIQVEQ TNFEGELIQW 
IHSMGPDDFL IINPGAWTHY SYAVRDAITS VQVPAIEVHL SNIHAREEFR KTSVIAPVCC 
GQISGLGGKS YSLALDYALE ALTQK