Gene Dhaf_3516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3516 
Symbol 
ID7260534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp3745652 
End bp3746737 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content52% 
IMG OID643563439 
Productstage III sporulation protein AA 
Protein accessionYP_002459970 
Protein GI219669535 
COG category[S] Function unknown 
COG ID[COG3854] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02858] stage III sporulation protein AA 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00709627 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGCTGC GCTATACTTT ACATCCCATA AACCCCAATC CCGAACTTAA ACCCAAAACC 
AAACCCCTGG CTGTTTCTAT AAATCAGGGA AAAGTGGCAG GGAAGAATCC CTCAGAGGAT 
TTTGGACGTT GGTTTGGCAG CAATCTGGCA GGCATTTTTC TGCAGATTCA GGATATAGCT 
CTCAAAGATA TAGAAGAAAT CCGCTTGCGC ATTGAGCGGC CCCTTTTGAT CCTGGGACAT 
CATCGAGAGC TGTTTATTGA TGAACAAGGT CGGACTGTTG CGGCGGAAAA GGGGTACCGG 
GTTCAGCGTG AAGATGTTTT ACAGGCCTTG GAGCGGATGA CCCAAAGTTC TCTCTATGCT 
GCCGAAGAGG AAATGAAGCA GGGGTTTATC ACTTTGCCTG GGGGGCACCG GGTTGGAATT 
ACAGGTGAAG CCATCATGAA ACAGGGGGAA GTGCAGACTC TGAAGCATAT TTCAGCTTTA 
AATATCCGCC TGGCCAAAGC TGTCGAAGGC AAAGCAGAGC TCATTTTACC CAAGCTTTTA 
ACAAAGGAAG GGACTCTGCA TCATACCTTA ATTCTTTCAC CGCCGCGGGC AGGAAAGACC 
ACTTTGCTGA GGGATTTAAT CCGCAGGCTC AGCGATGGCA GCCCTGCACT TAACCTGCCG 
GGTCAGACCG TAGGGGTGGT GGATGAACGG AGGGAATTGG CCGGTATGTG GCAGGGGATT 
CCTGCCTATA ACTTAGGGTG CCGTACCGAT ATTCTGGATG GTTGTCCGAA ACGGATGGGG 
ATCAATATGC TCATCCGCTC CATGGCTCCT CAGGTGGTGG CGGTGGATGA GCTGGGACAT 
CCTGAAGATG TGGAGGCCGT CCTGGATGCT TTGAGGACGG GGGTGAAGAT TCTCAGCACC 
GCCCACGCAG CCACTATGAG CGAAGCATTG AGGCGTCCCA CCTTAAAAGC ATTGTTTGAA 
TTCGGGGTTT TTGAACGGGT GGTGGTGCTC AGTCGCCGCC AGGGGCCCGG AACTGTTGAA 
GAGATTATCG TTTTGGCTCC GACGGATAGA GTTCATAAAG AGATGGTAAG GGGGGATGCT 
CTTTGA
 
Protein sequence
MSLRYTLHPI NPNPELKPKT KPLAVSINQG KVAGKNPSED FGRWFGSNLA GIFLQIQDIA 
LKDIEEIRLR IERPLLILGH HRELFIDEQG RTVAAEKGYR VQREDVLQAL ERMTQSSLYA 
AEEEMKQGFI TLPGGHRVGI TGEAIMKQGE VQTLKHISAL NIRLAKAVEG KAELILPKLL 
TKEGTLHHTL ILSPPRAGKT TLLRDLIRRL SDGSPALNLP GQTVGVVDER RELAGMWQGI 
PAYNLGCRTD ILDGCPKRMG INMLIRSMAP QVVAVDELGH PEDVEAVLDA LRTGVKILST 
AHAATMSEAL RRPTLKALFE FGVFERVVVL SRRQGPGTVE EIIVLAPTDR VHKEMVRGDA 
L