Gene Dhaf_3441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3441 
Symbol 
ID7260459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3675134 
End bp3675571 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content48% 
IMG OID643563364 
Productanti-sigma F factor 
Protein accessionYP_002459895 
Protein GI219669460 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID[TIGR01925] anti-sigma F factor 


Plasmid Coverage information

Num covering plasmid clones78 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAA ACCTTTTAGA TCTTAAGTTC TCTAGTCTGG GCGAGAATGT GGGAATCGCC 
CGGATGCTGA TTGCCTCCGT CGGGGCCCAA CTGGACCTTT CACTCAACGA TATTGAGGAA
CTTAAGGTCG TCGTCAGTGA AGCGGTTTCC AATGCAATTA TTCATGGTTA TGCCAATCAT
CCGGACAAGC TGGTTCAATT AATCATTGAA CAAAATCCTG AAGCCTTAAA AATCATTGTC
AAGGATGAGG GGTGTGGCAT ACCCGACGTG GAGCAAGCCA TGCAGCCGGC CTTCAGCACG
GATCCTGAGC GCATGGGGCT GGGATTTGTC TTCATGCAAT CCTTCATGGA TGATCTCCAG
GTGGAGTCAG CAGTCAATCA AGGGACCACT GTCACAATGA TTAAACAACT TGACAATATC
CAGCCCTCCA CGCATTAG
 
Protein sequence
MKRNLLDLKF SSLGENVGIA RMLIASVGAQ LDLSLNDIEE LKVVVSEAVS NAIIHGYANH 
PDKLVQLIIE QNPEALKIIV KDEGCGIPDV EQAMQPAFST DPERMGLGFV FMQSFMDDLQ
VESAVNQGTT VTMIKQLDNI QPSTH