Gene Dhaf_3426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3426 
Symbol 
ID7260444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3660774 
End bp3661754 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content50% 
IMG OID643563349 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_002459880 
Protein GI219669445 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGGTA GAATTTTCAG CGGCATGCGC CCTACGGGGA GCCTGCATAT CGGGCATCTC 
AGTGTCATCC AGAATTGGGC CGCACTGCAA TCGGAATATC AAAGCTATTA TGGAATTGTG
GATCAGCATG CTCTGACGAC AGGTTATGAG GATGGTTTGG ATTTTGGCGT ACTTATCCGG
GAGATTGCTC TGGATTGGCT GAGTGTGGGG ATTGATCCGG AGCAGTCGGC GATTTTTGTT
CAATCCCATA TTAAGGAACA TGCAGAACTG CATCTGCTTT TGTCCATGAT TACCCCTCTA
TCCTGGCTGG AGCGGGTGCC GACCTATAAG GATCAAATGC AGCAGCTGGG CAAAGAAGGA
GGCAAGGATA TCTCAACCTA TGGTTTCCTG GGCTATCCCC TCTTGATGGC TGCCGATATC
TTGGTTTATA AGGCTGATAC CGTACCGGTG GGAGAAGATC AAATCCCCCA TGTCGAGCTG
TGCCGCGAAA TTGCCAGACG CTTTAATCAC CTTTATGGTC CGGTTTTTCC TGAACCGAAA
GCCCTGATCG GCAAAGTTCC CCTGTTGCCC GGTGTCGATG GACGTAAAAT GAGTAAAAGC
TATAATAATA CCATCTCCTT AACCGCTTCC ACAGCAGAGA TCAAAGAAAG GGTTCAGCAG
ATGGTGACGG ACCCGGCCCG TTTGCGCAAA GATGACCCGG GTCATCCTGA AGTTTGTATA
GTCTATAAAT TTCATGAGGT GTATACACCT GAAGTCGCCG AAGTTGAGGA AAACTGTCGC
GGAGGCAAGA TCGGCTGTGT GGCTTGTAAG CGTCATCTGG CCGAGAACCT TGATAAGCTG
CTCAGTCCTT TCCGTGAGCG CCGTGCCCTT TGGGAAGAGC CTGGTAAGGT TGAGCGGGTT
TTGGAGCAGG GGGCTGAACA AGCCCGCCAA GTTACTCAAG AAACTATGAA AGAAGTTCGT
CACGTGATGG GGCTGAGATG A
 
Protein sequence
MKGRIFSGMR PTGSLHIGHL SVIQNWAALQ SEYQSYYGIV DQHALTTGYE DGLDFGVLIR 
EIALDWLSVG IDPEQSAIFV QSHIKEHAEL HLLLSMITPL SWLERVPTYK DQMQQLGKEG
GKDISTYGFL GYPLLMAADI LVYKADTVPV GEDQIPHVEL CREIARRFNH LYGPVFPEPK
ALIGKVPLLP GVDGRKMSKS YNNTISLTAS TAEIKERVQQ MVTDPARLRK DDPGHPEVCI
VYKFHEVYTP EVAEVEENCR GGKIGCVACK RHLAENLDKL LSPFRERRAL WEEPGKVERV
LEQGAEQARQ VTQETMKEVR HVMGLR