Gene Dhaf_3408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3408 
Symbol 
ID7260426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3644287 
End bp3645945 
Gene Length1659 bp 
Protein Length552 aa 
Translation table11 
GC content52% 
IMG OID643563331 
ProductL-lactate transport 
Protein accessionYP_002459862 
Protein GI219669427 
COG category[C] Energy production and conversion 
COG ID[COG1620] L-lactate permease 
TIGRFAM ID[TIGR00795] L-lactate transport 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.432982 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTGGA CTCAAAACTA TTCTGCTTTG GGAGGAAGTA TAGCCCTGAC AGCTTTGGTT 
GTCTCCATCC CTATTTTCTT CCTCTTATGG GCGCTGGCCA TTAAACGTAT GAAAGGACAT
ATTGCGGGTA TGTCGACCCT GCTCATTACC CTCGTCATTG TTGTCCTTGT CTACAAGATG
CCGATCTCCA TCGCTCTTTC AGCAAGCCTT TATGGAATTC TCTATGGGCT CTGGCCGATT
TCCTGGATCG TGGTTACCGC AGTGTTCTTA TATAATTTAA CCGTTGAGGC CGGCCAATTC
GATGTCATTA AAGGCTCTAT TTCCTCAATT TCCAATGACC GGCGGATCCA AGCTTTATTG
GTGGCATTCT GTTTTGGGGC TTTTTTAGAA GGAGCTGCCG GGTTCGGTGC ACCTGTGGCT
ATCTCAGCCT CGATTCTGAT CGGTTTAGGC TTTAACCCAC TCTATGCAGC AGGACTTTGC
TTAATTGCCA ACACGGCACC TGTGGCCTTT GGTGCCATCG GCGCACCAAT TATCGCAGCG
GGTGCAGTCA CCGGCATGGG GGATTTTGTC ATTTCCCAGG CTATAGGACG TCAACTTCCT
TTCCTGTCGG TGATCATCCC TATCTACCTG GTGGTGCTTA TGTCCGGTTG GAAAGGAGCC
AAGGAAGTTC TTCCGGCAGC CCTTGTGGCA GGGATCGCCT TCGCCGTTGC CCAGTGGTGG
TCCTCTAACC ATCTGGGTGC CTATTTGCCG GATATTATCT CTTCGTTGTT CTCCTTGATT
GCCCTGACCT TGTTCCTGCG TGTATGGAAG CCCAAAAATA ACTGGCGCTT CCCTCATGAA
GAAGGTAAAG AGGATAACGT GGTTGCGCAA AGATTTACGG CAGGGCAGAT TATCAAGGCC
TGGTCGCCCT TTGCTATACT CACTGTCCTG GTCGGAATTT GGGGAACCCC CGGGTTCAAG
ACCTGGGCTA CCAATGCCGG GCTTTACGTC AATATAGCTC ATTGGCCGGG ATTGGATGGG
CTGGTCTATA AGGCGGCTCC CATTGTCGCC AAGCCCACCG TCTATGCAGC AGCCTATAAA
TGGGATTGGT TTTCTGCCGC CGGGACAGCC ATTTTAATCT CTGCCATCAT CTCCATGTTC
ATTCTCGGGG TTAGCCCCGG AAGAGCCTGG AAGGTCTTTG TCAAGACACT TAAACAATTA
ACCTTTGCGA TTATCAATAT TGCTTCGGTT CTGGGGTTCG CCTACTTAGC CAACTATTCG
GGGCTGTCCT ATACCTTGGG TCTGCTCTTT GCTTCGACAG GTTCCCTGTT CCCCTTCCTG
TCTCCTGTCT TGGGATGGCT GGCCGTGTTC CTCACCGGTT CGGATACCTC GGCCAACGCC
TTGTTTGGTA AATTGCAGCA GGTCACCGCC GAGCAGATCG GGGTTAATCC GGTCCTGACT
GTGGCGGCCA ACAGCTCCGG CGGGGTTGTG GGCAAGATGA TTTCGCCCCA GTCCATTGCG
GTGGCGGCTG CAGCTACATC TCTGGTGGGG AGGGAGTCAG AGCTGTTGCG GTTTACCCTC
AAGCATTCCC TGATTCTATT GCTCGTCATA TGTATTATGA TTACTCTGCA GGCCTATGTG
GTTCCGGGAA TGATTCCGGT GATCACGGCA GGGCCCTAA
 
Protein sequence
MPWTQNYSAL GGSIALTALV VSIPIFFLLW ALAIKRMKGH IAGMSTLLIT LVIVVLVYKM 
PISIALSASL YGILYGLWPI SWIVVTAVFL YNLTVEAGQF DVIKGSISSI SNDRRIQALL
VAFCFGAFLE GAAGFGAPVA ISASILIGLG FNPLYAAGLC LIANTAPVAF GAIGAPIIAA
GAVTGMGDFV ISQAIGRQLP FLSVIIPIYL VVLMSGWKGA KEVLPAALVA GIAFAVAQWW
SSNHLGAYLP DIISSLFSLI ALTLFLRVWK PKNNWRFPHE EGKEDNVVAQ RFTAGQIIKA
WSPFAILTVL VGIWGTPGFK TWATNAGLYV NIAHWPGLDG LVYKAAPIVA KPTVYAAAYK
WDWFSAAGTA ILISAIISMF ILGVSPGRAW KVFVKTLKQL TFAIINIASV LGFAYLANYS
GLSYTLGLLF ASTGSLFPFL SPVLGWLAVF LTGSDTSANA LFGKLQQVTA EQIGVNPVLT
VAANSSGGVV GKMISPQSIA VAAAATSLVG RESELLRFTL KHSLILLLVI CIMITLQAYV
VPGMIPVITA GP