Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_3408 |
Symbol | |
ID | 7260426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 3644287 |
End bp | 3645945 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643563331 |
Product | L-lactate transport |
Protein accession | YP_002459862 |
Protein GI | 219669427 |
COG category | [C] Energy production and conversion |
COG ID | [COG1620] L-lactate permease |
TIGRFAM ID | [TIGR00795] L-lactate transport |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.432982 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCTTGGA CTCAAAACTA TTCTGCTTTG GGAGGAAGTA TAGCCCTGAC AGCTTTGGTT GTCTCCATCC CTATTTTCTT CCTCTTATGG GCGCTGGCCA TTAAACGTAT GAAAGGACAT ATTGCGGGTA TGTCGACCCT GCTCATTACC CTCGTCATTG TTGTCCTTGT CTACAAGATG CCGATCTCCA TCGCTCTTTC AGCAAGCCTT TATGGAATTC TCTATGGGCT CTGGCCGATT TCCTGGATCG TGGTTACCGC AGTGTTCTTA TATAATTTAA CCGTTGAGGC CGGCCAATTC GATGTCATTA AAGGCTCTAT TTCCTCAATT TCCAATGACC GGCGGATCCA AGCTTTATTG GTGGCATTCT GTTTTGGGGC TTTTTTAGAA GGAGCTGCCG GGTTCGGTGC ACCTGTGGCT ATCTCAGCCT CGATTCTGAT CGGTTTAGGC TTTAACCCAC TCTATGCAGC AGGACTTTGC TTAATTGCCA ACACGGCACC TGTGGCCTTT GGTGCCATCG GCGCACCAAT TATCGCAGCG GGTGCAGTCA CCGGCATGGG GGATTTTGTC ATTTCCCAGG CTATAGGACG TCAACTTCCT TTCCTGTCGG TGATCATCCC TATCTACCTG GTGGTGCTTA TGTCCGGTTG GAAAGGAGCC AAGGAAGTTC TTCCGGCAGC CCTTGTGGCA GGGATCGCCT TCGCCGTTGC CCAGTGGTGG TCCTCTAACC ATCTGGGTGC CTATTTGCCG GATATTATCT CTTCGTTGTT CTCCTTGATT GCCCTGACCT TGTTCCTGCG TGTATGGAAG CCCAAAAATA ACTGGCGCTT CCCTCATGAA GAAGGTAAAG AGGATAACGT GGTTGCGCAA AGATTTACGG CAGGGCAGAT TATCAAGGCC TGGTCGCCCT TTGCTATACT CACTGTCCTG GTCGGAATTT GGGGAACCCC CGGGTTCAAG ACCTGGGCTA CCAATGCCGG GCTTTACGTC AATATAGCTC ATTGGCCGGG ATTGGATGGG CTGGTCTATA AGGCGGCTCC CATTGTCGCC AAGCCCACCG TCTATGCAGC AGCCTATAAA TGGGATTGGT TTTCTGCCGC CGGGACAGCC ATTTTAATCT CTGCCATCAT CTCCATGTTC ATTCTCGGGG TTAGCCCCGG AAGAGCCTGG AAGGTCTTTG TCAAGACACT TAAACAATTA ACCTTTGCGA TTATCAATAT TGCTTCGGTT CTGGGGTTCG CCTACTTAGC CAACTATTCG GGGCTGTCCT ATACCTTGGG TCTGCTCTTT GCTTCGACAG GTTCCCTGTT CCCCTTCCTG TCTCCTGTCT TGGGATGGCT GGCCGTGTTC CTCACCGGTT CGGATACCTC GGCCAACGCC TTGTTTGGTA AATTGCAGCA GGTCACCGCC GAGCAGATCG GGGTTAATCC GGTCCTGACT GTGGCGGCCA ACAGCTCCGG CGGGGTTGTG GGCAAGATGA TTTCGCCCCA GTCCATTGCG GTGGCGGCTG CAGCTACATC TCTGGTGGGG AGGGAGTCAG AGCTGTTGCG GTTTACCCTC AAGCATTCCC TGATTCTATT GCTCGTCATA TGTATTATGA TTACTCTGCA GGCCTATGTG GTTCCGGGAA TGATTCCGGT GATCACGGCA GGGCCCTAA
|
Protein sequence | MPWTQNYSAL GGSIALTALV VSIPIFFLLW ALAIKRMKGH IAGMSTLLIT LVIVVLVYKM PISIALSASL YGILYGLWPI SWIVVTAVFL YNLTVEAGQF DVIKGSISSI SNDRRIQALL VAFCFGAFLE GAAGFGAPVA ISASILIGLG FNPLYAAGLC LIANTAPVAF GAIGAPIIAA GAVTGMGDFV ISQAIGRQLP FLSVIIPIYL VVLMSGWKGA KEVLPAALVA GIAFAVAQWW SSNHLGAYLP DIISSLFSLI ALTLFLRVWK PKNNWRFPHE EGKEDNVVAQ RFTAGQIIKA WSPFAILTVL VGIWGTPGFK TWATNAGLYV NIAHWPGLDG LVYKAAPIVA KPTVYAAAYK WDWFSAAGTA ILISAIISMF ILGVSPGRAW KVFVKTLKQL TFAIINIASV LGFAYLANYS GLSYTLGLLF ASTGSLFPFL SPVLGWLAVF LTGSDTSANA LFGKLQQVTA EQIGVNPVLT VAANSSGGVV GKMISPQSIA VAAAATSLVG RESELLRFTL KHSLILLLVI CIMITLQAYV VPGMIPVITA GP
|
| |