Gene Dhaf_3407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3407 
Symbol 
ID7260425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3642759 
End bp3644003 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content45% 
IMG OID643563330 
Producttransposase IS4 family protein 
Protein accessionYP_002459861 
Protein GI219669426 
COG category[L] Replication, recombination and repair 
COG ID[COG3385] FOG: Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000111807 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGACA AGGATACTAC GCAATCCACA TTTATGCAAG CCTTTCAGCC GTTTTTTTCG 
AAAGATCTAT GGGAAACTAT TCACCGGGAG GTCCCTGGCC TTGACCTTCG GTCTCAAAAA
CTAACAACCA ATCAACTCAC TCTCCTCATT AGCCATGCTC AACTTCAAGA ATACAGAGCT
TTGCGAAAGA TCAGTACAAG TGTTCACCAT GACAGTTTAG GTCAAGCTAT CGGACTCGAA
AGCATTAGTC ACAGCCAGAT TTCCCGAAGG TTAAAGACCT TACCCACTCA AGTTCCGGAA
ATGCTTTTTA AGGGCACTTT ACATAACGTA GCTCAAAAGC AAGGGTATGG GAAGATTCGG
CAGCAACTCG GAAAATTGTA CATGATTGAT GCATCCACCA TGAGCCTATG CCTTTCCCGC
TACCCCTGGG CAGTCTTTAG AAAGAGCAAA GCCGGTGTCA AAATGCATCT GCGTTTAAGC
TTTGATGCAA TGGCTGTCCC GGATGAAGTG CTCGTTACCC CGGCCAAGAC CGCCGACCGC
AAGAAACTGG ATGAGCTCAT TGTTCAAGAC CAAGAGGCTT TGAATATCTT TGATCGGGGT
TATGTGGATT ATAAGCTCTT TGATGATTAC TGTGAAAAGG GAATACGCTT TGTGACTCGT
CTCAAAAACA ACGCGGTGAT AGAGTTTACT GGAGTAGAAC GTCCAGTCAA AGAAGATGGG
CTCATCGAAG AGGACGTGGA TGTCATCTTA GGAGCAGGTT CTCGAAAAAT GAAGCATACC
CTTCGGGAAG TGACGATAGA TGATAACGTC CATGAACCCT TCACCATCCT GACGAATGAT
TTTAACCTAA GTGCCGAAGA ACTCGGTGAG ATCTATCGCT ATCGCTGGCA GATTGAGTTA
TTTTTTAAAT GGCTCAAGCA GCATGCTCAA ATTAAACACT TTTACGGCAC GAGTGAGACC
GCAGTCATCA ACCAAATCCT CCTAGCCCTG ATGATGTATT GCTTATTAGT TCTGCTCAAG
CTTGAGGCGG GCTATCCAAG AGATTTACTC ACTTTGCAGC GACTGCTGAT CGCCTGTCTG
TTTGAGAGGT ATGAAGAGTT TTTGGAGAAG CTGCGACGAC GAAGGAGAAA GGGCTCCAAA
CGAATCCGTT ATGAGGAGAT CTATAGAATG ACGGAGCATT CTATCTTGAA AGAAGAAGAG
ACCCAATGGC TCGATGATTT AACCTATGAC CCAGTGATAC TGTAA
 
Protein sequence
MQDKDTTQST FMQAFQPFFS KDLWETIHRE VPGLDLRSQK LTTNQLTLLI SHAQLQEYRA 
LRKISTSVHH DSLGQAIGLE SISHSQISRR LKTLPTQVPE MLFKGTLHNV AQKQGYGKIR
QQLGKLYMID ASTMSLCLSR YPWAVFRKSK AGVKMHLRLS FDAMAVPDEV LVTPAKTADR
KKLDELIVQD QEALNIFDRG YVDYKLFDDY CEKGIRFVTR LKNNAVIEFT GVERPVKEDG
LIEEDVDVIL GAGSRKMKHT LREVTIDDNV HEPFTILTND FNLSAEELGE IYRYRWQIEL
FFKWLKQHAQ IKHFYGTSET AVINQILLAL MMYCLLVLLK LEAGYPRDLL TLQRLLIACL
FERYEEFLEK LRRRRRKGSK RIRYEEIYRM TEHSILKEEE TQWLDDLTYD PVIL