Gene Dhaf_3388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3388 
Symbol 
ID7260406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp3622394 
End bp3623077 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content45% 
IMG OID643563311 
ProductAbortive infection protein 
Protein accessionYP_002459842 
Protein GI219669407 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.000000000121988 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCCCA GAAAATTAAC TTGGGTTGAC TTATTTTATG CCCTTCTGGG CATCATCTTT 
CTTTATCTCG GTGTAGGCTA TGTCATGGCC TGGTTCGCCA GTTGGTGGGA ATATGAGCGT 
GTTCTGCTTT ATGTTAATGG CTTTGTGACC CAAGGTATGT TTCTGGTTGT TATTATAGCC 
ATCATGAAAG TCCGCCGCTG GACCTGGAGT GATTTGGGAT GGAAGGATGT TAAGGGCAGA 
TATGTGGGAA GTGTAATCGC CTTTTATATA CTGACCTGGA TTATTAATAT TTTTTATGCA 
GCGTATTTGC TGCAGAAAGG ATTTACCCCT CCGGATACAG ATGTTTATAC ACAATTAATG 
GGCAATGCCA CGGTGGTGAC CTTTTGCCTT AATCTTATCC TGGCCGGCAT GCTGGCCCCG 
ATTATTGAAG AGACCATGTT TCGCGGAATT ATCTTCGGCA GTTTGCAGAC TTATATGGGT 
AAGTGGACTG CAGCGGCCGT AAGTGCGGCG ATTTTTTCCG GACTGCATTT GCAGTCTTAC 
GGCTTTCTGC CCCGTTTTGT TCTGGGGATG GTCCTGGCTT ATCTTGTAAT GAAGCATAAG 
TCCATCAAAC CTGCCGTAGC TTTACATGCC GTCAATAATA TTGTGGCCTT GCTTTTAGTT 
GCTCTTTCCG AGGGACTGGT GTGA
 
Protein sequence
MMPRKLTWVD LFYALLGIIF LYLGVGYVMA WFASWWEYER VLLYVNGFVT QGMFLVVIIA 
IMKVRRWTWS DLGWKDVKGR YVGSVIAFYI LTWIINIFYA AYLLQKGFTP PDTDVYTQLM 
GNATVVTFCL NLILAGMLAP IIEETMFRGI IFGSLQTYMG KWTAAAVSAA IFSGLHLQSY 
GFLPRFVLGM VLAYLVMKHK SIKPAVALHA VNNIVALLLV ALSEGLV