Gene Dhaf_3298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3298 
Symbol 
ID7260314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3530497 
End bp3532617 
Gene Length2121 bp 
Protein Length706 aa 
Translation table11 
GC content47% 
IMG OID643563219 
Productputative cell wall binding repeat 2-containing protein 
Protein accessionYP_002459752 
Protein GI219669317 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[Z] Cytoskeleton 
COG ID[COG5184] Alpha-tubulin suppressor and related RCC1 domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGTCA AATACTTTTC TAAAAAAATC TCAATTGTTT TAGCTTTACT GGTTATGTTT 
TCGAGTCTTC CCAATGTGCC CGTTTCAGCC GATCCGAATC CTTTGAATGC TGTCATTCCC
AAATATCAGG AGGAGAGGCA ATTTGGCTTC AGCGCAGGAG GGCTTCATAC CGTTTGGTTT
GACACCTCTC ATGGTGGTGA TGTGACAGCT TCAGGCAACA ATGATTATGG ACAACTTGGT
GATGGTACAA CTATATCACG CTCCTTGCCT GTCACCATTA ATAATCTCTA TTCCCGTGTT
GCGGATATTT CGGCAGGCGG TACTCATAAT CTTGCCCTTA TTGATGACCA GACAGTGCGG
GCATGGGGAA ATAATCAAAA AGGGCAGCTT GGCATTGGCT CTGATATCAA TAGTCTTATT
CCTGTGGAGG TACCTGGTCT AAGCGAAATT ATCGCCATTT CCTCAGGTTT CGATTTTAGT
CTCGCCCTCA AAAATGATGG AACCGTTTAC TCTTTCGGGA GCAATGAGTT TAACCAATTA
GGTGACAGCT CTGTCGGGAG TCGGAATACC CCGGCACAGA TTCCAGGCTT AGACAGTATT
GTTGCCATCG CTGCCGGGGG TACCCATGCC TTAGCTTTGC ACATGGATGG CAGTGTGTAT
GCTTGGGGCA GCAATGAGCG GGGTGAACTT GGCGATGGTG GATCAGCGTC CGGTTATCAA
CCTGTAAAGA TAGCTTCATT AAGCAATATT ACTGCCATCT CAGCCGGGTT AAGGCATTGC
CTGGCCTTGG GGGCTGATGG AAGTGTCTAT GCATGGGGAG ATAACTCGTT GGGGCAACTG
GGAGACCCCA AAATTTCCGA TTATAGCAAT GTGCCGATCA AGGTTCAAGG AATTAAGGCC
GCTTTTCGGA TTGCGGCCGG ATATAACTCC AGCTTTATTA TTGCCCAGCA AAATGCGACC
TATGGATTTG GTGACAACTC AGCCAACCAG ATTAATAGTT CGGCGGTTGA GAACTTATCC
TCACCAACAC TGCTCAACAT CAAAGCCTCC TTTATCTCTC CAGGATGGGG ACACACCGTA
TCCCGCGGCT TTCTCGGCAA TGATAACGGC GTTGATAACT GGAGTTGGGG ATATAACCAA
TTTGGGCAAA CAGGCAATGG TTTGACTGAG CATGTCCTGA ATCCGACAGC ACCCTATTCC
GGAACGAATC GCCAACCTGT ATTTTTTCGG ATTTCCGGGG CCAATCGTTT CAAAACGGCT
GTTGCTATTT CCATTGAGGG ATGGGATTAT GGCGCAGCAA CTGTCGTTCT GGCCAGGGCG
GATAATTTTC CGGATGCTCT CGCCGGGACT CCATTAGCCT ATGGATTAAA CGCGCCAATA
TTACTAACGG ATTCGGCAAG ATTGTCAAAT GATACCAAAG ATGAATTAGA TCGCTTAGCT
CCGCAAAACA TCATTATCTT AGGCCAGGAA GGGGCTATCT CATCTTCCAT TGAAAAAGAC
CTTCAGAAGC ATTACAAGGT AACCCGAGTG GGCGGCCAGG ATCGCTATGA AACAGCTGCG
GCCATCGCCC AGTATATGCA CGATCATCAT TTGATTTTAG GAAATAAAGC CGTCATAGCT
TATGGCGAAA ATTTCCCGGA TGCTTTGGCG GTATCTTCGG TAGCGGCCCA TGCCCATATG
CCGATATTAT TAACCAAAAA AGATGTATTA GCTGATGCTG CCGGTGAAGC GTTAAAGCGC
CTTGGTATAA ACGAGACATT CATTGTCGGT GGTACCGGGG TCGTGGGGAC TGCAGTAGAG
AGCAGTCTTC CGCTGCCTAC ACGGTACTCA GGAAATGACC GTTATGCAAC AGCTATTGCT
ATTGCCAACG GTATGGGCAC CGATCCCTAT CTCGTCTATT TAGCTACAGG AACTAACTTT
CCGGATGCAC TTGCCGGTTC AGTTCTTGCG GCCAGAAGCA ACAGTCCTAT TATCTTAGTT
AATTCAAGTT CAGGTGCGGA AGCAGCAGCA CAATGGTTTT GGTGGAACAG CAGGGATATA
AAGCAGTCCT ATGTACTAGG GGGTTCAGGT GCCGTTCCGG ATTCTGTTAT AGAAAGCATT
TATAGTCGAA TCGGCTATTA A
 
Protein sequence
MKVKYFSKKI SIVLALLVMF SSLPNVPVSA DPNPLNAVIP KYQEERQFGF SAGGLHTVWF 
DTSHGGDVTA SGNNDYGQLG DGTTISRSLP VTINNLYSRV ADISAGGTHN LALIDDQTVR
AWGNNQKGQL GIGSDINSLI PVEVPGLSEI IAISSGFDFS LALKNDGTVY SFGSNEFNQL
GDSSVGSRNT PAQIPGLDSI VAIAAGGTHA LALHMDGSVY AWGSNERGEL GDGGSASGYQ
PVKIASLSNI TAISAGLRHC LALGADGSVY AWGDNSLGQL GDPKISDYSN VPIKVQGIKA
AFRIAAGYNS SFIIAQQNAT YGFGDNSANQ INSSAVENLS SPTLLNIKAS FISPGWGHTV
SRGFLGNDNG VDNWSWGYNQ FGQTGNGLTE HVLNPTAPYS GTNRQPVFFR ISGANRFKTA
VAISIEGWDY GAATVVLARA DNFPDALAGT PLAYGLNAPI LLTDSARLSN DTKDELDRLA
PQNIIILGQE GAISSSIEKD LQKHYKVTRV GGQDRYETAA AIAQYMHDHH LILGNKAVIA
YGENFPDALA VSSVAAHAHM PILLTKKDVL ADAAGEALKR LGINETFIVG GTGVVGTAVE
SSLPLPTRYS GNDRYATAIA IANGMGTDPY LVYLATGTNF PDALAGSVLA ARSNSPIILV
NSSSGAEAAA QWFWWNSRDI KQSYVLGGSG AVPDSVIESI YSRIGY