Gene Dhaf_3260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3260 
Symbol 
ID7260276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3492298 
End bp3493740 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content51% 
IMG OID643563182 
Productiron-sulfur cluster binding protein 
Protein accessionYP_002459715 
Protein GI219669280 
COG category[C] Energy production and conversion 
COG ID[COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain 
TIGRFAM ID[TIGR00273] iron-sulfur cluster-binding protein 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACTGG ATAATCACTA TGACGTTGAT GCCGCTTTAG ATAAAGCTCT TAAAGATGAT 
TTTCTGCGCA AGGCAACCCG CCGGGCTACC GATAGGCTGA GAAACAATAA ACTGGCTATT
ACCGAAGAGC TGGGGAACTG GGAAGAATGG CGCCAGGTGG GAGAAAGAAT CCGCAACCAC
GTCGTTGAAA ACCTGGATTA CTACCTTGAC ATGCTTATTG AAAATGTAGA AAAGAACGGC
GGCCACGTTC ACCTGGCCAA AACGCCGGAA GATGGGGTAA GAATCGTTCA GGAGATTTTC
CAAAAGCATG GCTTCAAATC GGTGATCAAA TCCAAATCCA TGATTACGGA AGAAATTCAC
CTTAACCCGG TCCTGGAGAA AGACGGTATT GAGGTTGTGG AGACCGATTT AGCAGAGTAT
ATTATCCAGA TCGCCGATGA ACCCCCTTCA CATATTATTG TTCCGGCTAT GCATAAAACC
CGGGAGCAAA TTGCCAAGCT CTTCGAGCCT ATAGCAGGAC ATCCGCTGGA ATCAGATACC
CCAACCCTGA CCAAATTTGC CCGGGAGCAG CTGCGGGAAA AATTCCTGAC CAGTAAAATC
GGCATAACCG GCTGCAACTT TGCCGTAGCG GATACAGGAA CCATCACTAT GGTTACCAAT
GAGGGCAATG GCCGTTTGAC CAGTACCATG CCCGAGGTCC AAATCACCAT GATGGGGATG
GAGCGGATTG TCCCTTCCTA CAAAGAGCTC AGCGTTCTTC TTAACCTGCT GGCCCGCAGC
GCCACAGGAC AGCGCCTCTC GGTCTACACC ACCATGATTA CTCCCCCCAA ACGGGAAGGG
GATATCGATG GACCTAAGGA ATGGCATTTG GTCATTCTCG ATCATAACCG CTCGGAAATC
CTAGGGGATG AGGATTTCCG CTCATCTCTG CGCTGCATCC GCTGCGGAGC CTGCTTCAAT
GTCTGTCCCG TTTATCGCCA GGTTGGCGGA CATGCTTACG GCTCTGTTTA TTCAGGCCCC
ATCGGAGTCG TCATTACTCC CCTCCTGGAA CAGAATTATG AGAAATGGGG GCATCTCCCC
TACTACTCCT CTCTCTGTGC GGCCTGCTCC GAAGCTTGCC CGGTACGGAT TCCCCTCCAG
GATTTAATCG TCAAGCATCG GGACCGCAAG GTGCTCAAAG GCTATACTTC GGGTGTGGAA
AAGAAGATCT TCAAATACTA TGGCTATTAC TTCTCCCATC CCAAGACCCT CAGCAAATTT
GTCCGCTTAG GCTCCAAATT CCAATTTATC CTCATGCGCA ACGGCAGAAT TGCCTCAGGA
CCGCCGCCCC TCAGCAATTG GACCAACAGC AAGACCTTAC CCCCTGTAGC CAAGCAAATG
TTCCGGGATC AATGGCCGGA GTTGGAGAAG AAACTAAAAA CTATGCAGCG AGGTGATCAA
TAA
 
Protein sequence
MSLDNHYDVD AALDKALKDD FLRKATRRAT DRLRNNKLAI TEELGNWEEW RQVGERIRNH 
VVENLDYYLD MLIENVEKNG GHVHLAKTPE DGVRIVQEIF QKHGFKSVIK SKSMITEEIH
LNPVLEKDGI EVVETDLAEY IIQIADEPPS HIIVPAMHKT REQIAKLFEP IAGHPLESDT
PTLTKFAREQ LREKFLTSKI GITGCNFAVA DTGTITMVTN EGNGRLTSTM PEVQITMMGM
ERIVPSYKEL SVLLNLLARS ATGQRLSVYT TMITPPKREG DIDGPKEWHL VILDHNRSEI
LGDEDFRSSL RCIRCGACFN VCPVYRQVGG HAYGSVYSGP IGVVITPLLE QNYEKWGHLP
YYSSLCAACS EACPVRIPLQ DLIVKHRDRK VLKGYTSGVE KKIFKYYGYY FSHPKTLSKF
VRLGSKFQFI LMRNGRIASG PPPLSNWTNS KTLPPVAKQM FRDQWPELEK KLKTMQRGDQ