Gene Dhaf_3253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3253 
Symbol 
ID7260269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3487231 
End bp3488004 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content52% 
IMG OID643563175 
ProductNLP/P60 protein 
Protein accessionYP_002459708 
Protein GI219669273 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000000111899 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TTATCAATAA ACTTTTCGTT TCTCTTCTAG CCTTGGGGTT TTTCGCCACT 
ACCCTCTTTG CTTACCCGCA GACCATGGCA GAGCCCGGTA CAGCTCAAGA TCTGGCTTGG
GTTGAGGAAA TGGCCCTTGC TCCCCAAAGC GATACTGTTG AAAGCGATCT TGAAGCTGTT
CTAGCCTCCA GAGAACTGGC CAGGGCCGAT GCCGACAGAC AAGCTGCAAT CGGAGCAGCA
ACCGGTGAAA TTTCCCGTGG GTCCCAGTCC AGCTCTGCAC CCTCACAAGC CCCGAAAAGC
ACTGCTTCCA GCTCTTCTGC CACTTCTGAC AAGAAGTCTG CCGCTACAAG CAAAAGCACC
GCCAGCGCCG CCAAAGCTTC CGTCAAAACC AGTGCCTCCA GCACTACCTC CAAAGCTACT
GCCGTGATCA ACACGGCCAA AAAGTATATC GGAGTGCCTT ATGTTTGGGG CGGCACTACG
ACCAGCGGCT TTGACTGCTC CGGATACACC CAGTACGTCT TCGCTCAGCA TGGCATTTCC
TTGCCCCGGG TATCCAGGGA TCAATATAAG GTGGGCACGG CCGTTTCTTA CAGCAACCTC
AAGGCCGGGG ACCTGGTCTT CTTCTCCTTG GATGGTGATA AAGTCATCGA CCATGTGGGG
ATTTTCCTGG GCAATGGACA GTTCATTAAT GCCTCCAGTT CAAAAGGAGT AACCATTTAT
ACCATGGGTT CCTATTGGCA ATCCCACTTC ATTGGAGCAA AGCGCGTATT TTAG
 
Protein sequence
MKKFINKLFV SLLALGFFAT TLFAYPQTMA EPGTAQDLAW VEEMALAPQS DTVESDLEAV 
LASRELARAD ADRQAAIGAA TGEISRGSQS SSAPSQAPKS TASSSSATSD KKSAATSKST
ASAAKASVKT SASSTTSKAT AVINTAKKYI GVPYVWGGTT TSGFDCSGYT QYVFAQHGIS
LPRVSRDQYK VGTAVSYSNL KAGDLVFFSL DGDKVIDHVG IFLGNGQFIN ASSSKGVTIY
TMGSYWQSHF IGAKRVF