| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3236 |
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| Symbol | |
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| ID | 7260252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 3469276 |
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| End bp | 3471609 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643563158 |
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| Product | DNA topoisomerase |
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| Protein accession | YP_002459691 |
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| Protein GI | 219669256 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAAGA CCTTGATCAT AGCCGAGAAA CCCTCCCAAG CCAGGGAATA TGCCAAGACT
CTTGGTGTAA AAGGAAAAAG GGAGGGCTAT TTTGAGAACG ACGAATACAT TATTTCCTGG
TGTATCGGTC ATTTGTTTGA ACTGAAAGCG CCGGAGAATT ATATGGATCT CCCTAAAGTG
GGCAAGCGCT GGAGCATCCG CCGCCTCCCC GTGCTTCCCC GGCTGGGGGA ATTCCAGTAT
GGGTTAAAAT CCGGCACTGC CAAGCAGTTT AAAGTGCTGC AGGGCTTGCT CAGGTCCCCG
GAGGTGCAGC AGGTTATTTG CGGGACGGAT GCCGATCGGG AAGGGCAACT GCTTTTTCAG
GAAGTATGGG ACGCTGTAGG CAGCAAGAAG CCTCTTTTCC GGCTCTGGAT TTCATCGTTG
ACCCAAGAGG CCATTCGTGA GGGGATGAGC AAACTGCGCC CCGTTGGCGA GGTGGAGGGC
TTGGCTCAGG CAGGGTATGG GCGTTCCTAT GGAGATTGGG ATTTTGGCAT GAATTTGACC
GAAGGGTTCA CCGCTCTTTT TGGCAGTTTC GATCCGGTGC GCAAAAAGCC TAATGTCATC
TCCATCGGCC GGGTTCAAAC TCCCACATTG GCCTTGGTGG TGGAGCAGGA ATGGGCGATC
GAGAATTTTG TCCCGGTTGC TTATGTGGAA GTGGAAGCGG AATTTGCAAG TGGGCAGGGC
TCTTATAAGG GGAAATGGTT TGACCCTGCC GTCAAGAACA CGCGTGACAA AAATCAGGAA
ACTGATAACG CTCAAATGAT GTTAGACCTG GACCGGGGTA AAGAGATTGT CGCTAAAGTT
CAGGGAAAAC CGGGCAGAAT TCGTTCCGTA AAAGATAAGG AGACTAAGGA GCCTCATCCT
TTGCTCTTTG ATCTAACCTC TCTAACCGTC AGTGCTTCCA AGCGCTATGG CTTTGGAGCG
GAAAAAGTGC TGAAAATTGC CCAATCCCTT TATGAAAAGA AAGCCATAAC CTACCCCAGA
ACCGATTGCA ATTATTTACC CCCTGACATG CTCCCCAAAC TGAAGGTTCA TCTGCAAGCT
TTGGAACAAA GCCCCTTTGC CTCATGGGTA AAGGAAGCTC TTGATAATCC TTTACCTGGG
GGAAAAAGGG TCATCAATGA GATTACGGCT CACCACGCGA TTATTCCTAC CACTGAAAAA
ATGATTCCGA ATTTGAGTCC GGATGAACGG AAAATCTGGG AAATGATTGT CCTGCGCTTT
CTCTGCATTT GGTTTCCCCC GGCCCGTTAT GCGGAAAAAG AGGTAGTTAC GGTAGTGGAA
GAGGAGTTCT TCCTGACCAA AGGCAAAACC TTGCTGGAAT CGGGATGGAA GAAGATCGAG
AATACGGAAA AGTACACGGA GGGATCCGGA CTCCAGCTCC CTTTGCTTCA GCAGAATGAG
GAGGTTGTGA CCCGGTCCTG TCAAGCCCTG CAAAAGGAGA CCAAGCCCCC CAAGCGCTAT
ACCCAAGGCG ATCTGATTAA AGCCATGGAG GGAGCCGGCA AGGAGATCGA GGATGAGACC
CTGCGCCGGC AATTAAAGGG AAAAGGACTG GGAACCGTGG CGACACGAGG GGCAATTATT
GAAAACCTCT TGGACCGGGG ATATCTTCTG CAGCAGCAGA AAGTCCTGGT GCCGACGGCA
AAAGGAACAG AGCTTATTCG CTTGATTAAA GAGCGCTTAC CCCGGGCTCA GCTGCTGATC
AGTGCTGAAA TGACCGGGCA GATGGAATAT GAATTGGCCC AGGTCGAACG GGGAGAATTG
CCTTTAAGCC GGTATATGGA GAAAGTCGAA GAGGCTATCC GGGGTATCAT TGAAGAGCTG
CGTCACTATG AAGCCACCCG GGGAAAAAAA CCACTGGCTT TTGCCCCTCA GAAGGCGGGC
GCTTCTGGCC GAAAGAGCAA AAGCAATCTG GAGGAGAAGC CCCAAGAGCT CCCTGTTCAG
GCCAAGGTTA CAAAGGCTGC CAAGACAAGG CAGGAGAGTC CAGCTTCGGC CGCCGAGGAA
AACTTGGGGA TCTGCCCCAG CTGCGGAGGC GGGGTAGTGG AGCGGGAAAA GGGTTATGGC
TGCCAAAACT GGAAAAATGG CTGCCCCTTT ATTCTTTGGA AGAATCCCAT CTGCGGCAAG
GTACTGACAC CTGCCCAGGT CAAGAGCTTA TTAAAGAAAG GAAAAACGAA TTTAATCAAG
GGTTTTCGCT CTAAAAATGG GAGCGTTTTC GCGGCTTATC TTGTTTGGGA AGATCCCTCT
TCAGGAAAGC TAAAGTTTGA GTTCGAGAAC AATGATCGGG CAAAGCCCGG TTAA
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| Protein sequence | MGKTLIIAEK PSQAREYAKT LGVKGKREGY FENDEYIISW CIGHLFELKA PENYMDLPKV
GKRWSIRRLP VLPRLGEFQY GLKSGTAKQF KVLQGLLRSP EVQQVICGTD ADREGQLLFQ
EVWDAVGSKK PLFRLWISSL TQEAIREGMS KLRPVGEVEG LAQAGYGRSY GDWDFGMNLT
EGFTALFGSF DPVRKKPNVI SIGRVQTPTL ALVVEQEWAI ENFVPVAYVE VEAEFASGQG
SYKGKWFDPA VKNTRDKNQE TDNAQMMLDL DRGKEIVAKV QGKPGRIRSV KDKETKEPHP
LLFDLTSLTV SASKRYGFGA EKVLKIAQSL YEKKAITYPR TDCNYLPPDM LPKLKVHLQA
LEQSPFASWV KEALDNPLPG GKRVINEITA HHAIIPTTEK MIPNLSPDER KIWEMIVLRF
LCIWFPPARY AEKEVVTVVE EEFFLTKGKT LLESGWKKIE NTEKYTEGSG LQLPLLQQNE
EVVTRSCQAL QKETKPPKRY TQGDLIKAME GAGKEIEDET LRRQLKGKGL GTVATRGAII
ENLLDRGYLL QQQKVLVPTA KGTELIRLIK ERLPRAQLLI SAEMTGQMEY ELAQVERGEL
PLSRYMEKVE EAIRGIIEEL RHYEATRGKK PLAFAPQKAG ASGRKSKSNL EEKPQELPVQ
AKVTKAAKTR QESPASAAEE NLGICPSCGG GVVEREKGYG CQNWKNGCPF ILWKNPICGK
VLTPAQVKSL LKKGKTNLIK GFRSKNGSVF AAYLVWEDPS SGKLKFEFEN NDRAKPG
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