| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3226 |
|---|
| Symbol | |
|---|
| ID | 7260242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 3453210 |
|---|
| End bp | 3454388 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643563148 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002459681 |
|---|
| Protein GI | 219669246 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000000000524014 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAGC AATATCTTCG GCCGATGGTT ATTTTGGTCA TTATCCAGTT CCTGGTTATG
GTGGGCTTCG GGATAGTCAT TCCCATCCTG CCTTTTTTGA TAGAAGAACT GGGCGGCGGG
GCTTTCTCAC TGGGGTTATT TATGTCTGCT TATTCCATTA TGCAGTTCTT CTTTGCCCCC
TTTTGGGGAA GGCTGTCGGA TCGCATCGGC AGACGGCCTG TTCTGTTAAT TGGACTTAGT
GGTTATGGCA TTACCTTTTT TCTCTATGGA ATGGCTGGAA ATCTGCCTCT TCTCATCGCT
TTTCGAGCTC TGTCGGGGGT GGTCTCTTCG GCCACTTTGC CTACCGCAAT GGCTTATATG
GCTGATATAA CGGAAGGAGC GGACCGGTCC AAGAGTATGG GGATGCTCGG AGCCGCCATG
GGATTGGGGA TGGTTTTCGG ACCGGCCTTA GGCGGTTTCC TGGGACATTA TAGCTTTACG
TTACCCTTTT ACTTTGCAGG AACTTTGGCT TTGCTCGTCC TGCCTTTTGC CTGGAAGCTG
CTGCCTGAAA CCCTCAAAGA ACCCAACCTG GAATCTAAAC CAAAAGTACG CTTTCATCCC
GGGGTGATTC GGGATCCTTT ATTCCCGCTG TTTATCTTCA ATTTCGTCCT TAGCTTTACG
ATGGCTATGT TTGAAAGCAC CTTTACCTTG TTTGCAGCCG AGCGGGTGGG ATTCGGGCCT
CAAGAGATGG GCATCGTTTT TATGATTATC GGCATTACTG GTGTGATCGT TCAGGGAATG
CTGATTGGCA AGGTGGTCAG GCGGTTTGGG GATGCCAAAC CGGCCAAGGT GGGAGCACTT
CTTTGCGCTG TGGCCTTCCT CTGGCTGCTT TGGGCACCTA ATGCTATCCT GTTGGTTCTG
GGAACGGTAG TATTTATGAT TGGAAATTCC TTTATGGTCC CCACCGGCTC CAGTTTGGTG
AGCAAGAACA GTCATACCGG GCAGGGAGCT TCGCTCGGTG TATTTCAATC CTTTGGCAGC
CTAGGCCGAA TTGCCGGCCC TCTGGTAGGG GGAGGCATCT ATGGATTATC CATGAATACC
CCCTATGTCA TTGGGGCGGC CACCCTGGTT TTGTGCCTGA TTTTCTTTGG CACCAAGATT
CAGGATCGTA AAGCGGGTGA GCCCGGCACT CCAGCTTAG
|
|---|
| Protein sequence | MQKQYLRPMV ILVIIQFLVM VGFGIVIPIL PFLIEELGGG AFSLGLFMSA YSIMQFFFAP
FWGRLSDRIG RRPVLLIGLS GYGITFFLYG MAGNLPLLIA FRALSGVVSS ATLPTAMAYM
ADITEGADRS KSMGMLGAAM GLGMVFGPAL GGFLGHYSFT LPFYFAGTLA LLVLPFAWKL
LPETLKEPNL ESKPKVRFHP GVIRDPLFPL FIFNFVLSFT MAMFESTFTL FAAERVGFGP
QEMGIVFMII GITGVIVQGM LIGKVVRRFG DAKPAKVGAL LCAVAFLWLL WAPNAILLVL
GTVVFMIGNS FMVPTGSSLV SKNSHTGQGA SLGVFQSFGS LGRIAGPLVG GGIYGLSMNT
PYVIGAATLV LCLIFFGTKI QDRKAGEPGT PA
|
|---|
| |