| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3201 |
|---|
| Symbol | |
|---|
| ID | 7260217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 3427910 |
|---|
| End bp | 3428434 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643563124 |
|---|
| Product | transcriptional regulator, CarD family |
|---|
| Protein accession | YP_002459657 |
|---|
| Protein GI | 219669222 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 66 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCAAG TGGGTGATAA GGTACTCTAT CCCATGTATG GAGCAGGAAT AATCGATTCC
ATTGAAGAAA AAGAGGTCTT AGGTGTTAAA GGGCAGTATT ACCTCCTGAA CATTCCTCAT
GTCAATATGG AAATTATGAT TCCAGTAGGC AAAGCTGAGG ATTTAGGGAT ACGCCAAGTG
GTCAACAGCG AGGTCGTCGA TGATGTACTG CGCTTTTTCT TTGAGGGAGA TACGGACCCC
GTCATGTTTG AAAGCAATAA CCGCTTTTAC CGTGATATCA ATAAGAAGAA AATGAAGAGC
GGCGATATCT ATCAGGAGAG CGAAATTATT CGCGACTTAA CGAGAAAGAG CAATCTCCAT
AAACTAGGAA TGGAAGATAA TAATATGCTG CACACTGCCT TGCAGCTTGT CACCAGTGAA
ATCGTTCAGG TGAAAGGCGT CGAAATGGAA AAAGCCGTGG AAATGCTCCA GAGCGTTATC
AATCAGGCTA AAGACGAAAA GGAAAAGCAG GAAGCTTTGG GCTGA
|
|---|
| Protein sequence | MFQVGDKVLY PMYGAGIIDS IEEKEVLGVK GQYYLLNIPH VNMEIMIPVG KAEDLGIRQV
VNSEVVDDVL RFFFEGDTDP VMFESNNRFY RDINKKKMKS GDIYQESEII RDLTRKSNLH
KLGMEDNNML HTALQLVTSE IVQVKGVEME KAVEMLQSVI NQAKDEKEKQ EALG
|
|---|
| |