| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3160 |
|---|
| Symbol | |
|---|
| ID | 7260171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 3377618 |
|---|
| End bp | 3378949 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643563080 |
|---|
| Product | protein of unknown function DUF81 |
|---|
| Protein accession | YP_002459619 |
|---|
| Protein GI | 219669184 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 67 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAGAA GACTTTATCA ATCTCTTATG GCAGCTTCCA GGGCGCATGC CCAATGGGAG
ATTGAAACCA CAACAAATAT TATTAAAAAT AGAAAGATGT TAATAATACT GTTGCTGATG
GCGCTGCCCC TAATCATTCC GGCCATGGTT CACGCTGCAT CTCTTCCAGA AGCCATCGGG
GGTAAAGCAG CTTATGGACC TTCTTATTTC TCAGCCAAAA TGTTTTATGG TTCCATAGCC
ATCGGTGTCG TAGCCGGCCT GGTCACCGGC TGTATTGGGG CCGGCGGAGG CTTTCTTATT
ACTCCGGCCC TGATGAGCTT AGGAGTTAAA GGGATATTAT CCGTTGGTAC AGACATGTTC
CACATCTTTG CTAAAGCAAT TATGGGAACC ACCCTCCATA AGAAGATGGG CAATGTCAAT
GTCGGATTAG CCGTTGCTTT TTTGGTCGGT TCCGGGCTCG GGGTCACGGG GGGCGGAATT
ATCAACAGAG CGTTATATAA CTATAACCCC GTCATGAGTG ATTTTACTAT CAGCATGATC
TACGCTGTTT TGCTGGGATT CTTAGGATTC TTTGCTTTAA GCGATTATTT TAAAGTGAGA
AAAAGTGAAC TGTCCAAAAA CAAGATCGGC CTGGAAAAAC TAACCCCAAT GGCTGAAAGA
ATGCAATCCG TCAACCTTGC CCCGATGATT CAATTTGATG AAAAAATAGT CCCGGGCGGG
CGAAAAATAT CCGGAGTGTT TGTCGCCATA AGCGGAGCCA TCACCGGACT TTTAGCAGCC
ATCCTTGGTG TTGGCGGCGG TTTTGTGACC TTCCCGATGT TTGTGTATGG ACTGGGGATT
TCGACCTATA CAACCGTGGG TACAGATATC CTGCAGATTA TTTTTACCGC CGGTTATGGT
GCCATTGCCC AATATGCACT TTACGGTTAT ATATTCTATA CACTGGCTAT GGGGTGTTTA
TTAGGATCAT TGTTGGGTGT TCAAATAGGC GCAATCACGA CCAAGGTAGT TTCCCAATCC
AAAATTAAAG CTTTCTACGC CATAGCAATA TTGGCCGGTT TTATCAACAG AATTTTTGCC
CTGCCGGAAA AGTTAAGTCA AATGGGTTAT ATCAGCTTAA CTCCTTCCAC AGGCGCAATA
CTTACCAATA TCGGAGTATG GGTGTTTTTT GGTTTGGTAG CGATATTCGC TGTTTGGATC
ATTGGGACCT TTATAGTGAA CGTGCCGAAT CTCCGGGCTG AATATGATGA AGGCAGCAAA
GCTGAATATA ATGCTGAATA TGGCGAAGAC AACAAGGCTG TTGTGTCGAC GAAAAGAGGT
GCCGCCCAAT GA
|
|---|
| Protein sequence | MMRRLYQSLM AASRAHAQWE IETTTNIIKN RKMLIILLLM ALPLIIPAMV HAASLPEAIG
GKAAYGPSYF SAKMFYGSIA IGVVAGLVTG CIGAGGGFLI TPALMSLGVK GILSVGTDMF
HIFAKAIMGT TLHKKMGNVN VGLAVAFLVG SGLGVTGGGI INRALYNYNP VMSDFTISMI
YAVLLGFLGF FALSDYFKVR KSELSKNKIG LEKLTPMAER MQSVNLAPMI QFDEKIVPGG
RKISGVFVAI SGAITGLLAA ILGVGGGFVT FPMFVYGLGI STYTTVGTDI LQIIFTAGYG
AIAQYALYGY IFYTLAMGCL LGSLLGVQIG AITTKVVSQS KIKAFYAIAI LAGFINRIFA
LPEKLSQMGY ISLTPSTGAI LTNIGVWVFF GLVAIFAVWI IGTFIVNVPN LRAEYDEGSK
AEYNAEYGED NKAVVSTKRG AAQ
|
|---|
| |