Gene Dhaf_3123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3123 
Symbol 
ID7260134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp3336992 
End bp3337549 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content46% 
IMG OID643563043 
ProductCDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 
Protein accessionYP_002459582 
Protein GI219669147 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID[TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00381787 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATTTAC CCAATCAACT CACAATGGCG CGGATAATAT TAATACCCAT CTTTATGGCC 
TTGTTGCTCA TCCAATTTCC TAAAGGTCAG CCGATTTTTC CTTATCAGGA TTTTGTGGCG 
GCCATGATCT TCATCCTGGC AGCTGCGACG GATGGCTTGG ATGGTTATAT CGCCCGTAAA 
AGAGGCCAGG TTACAGTTCT GGGAAAATTT ATGGATCCGC TGGCAGATAA ACTTTTGGTT 
TCGGCAGCTT TAATTGCGTT GGTGGACTTG GGGCATGTGC CGGCGTGGAT TTGCTGGATT 
ATACTGGCCC GGGAGTTCGC AGTGACAGGG TTGAGAGCCA TAGCCTCTGC TGACGGAACT 
GTGATTGCAG CCAGCAAACT GGGCAAGATT AAAACCGTAT CCCAGGTTGT GGCTATTTCT 
CTGATTCTGC TCCATGATTG GCCTTTATCC CTCTTCAACC TCTATCTGGG ACAGCCGCTT 
CTCTATGTAG CCCTTTTCTT TACGATTGTT TCAGGTGTGG ATTATTTAGT AAAATCGAAG 
AAGCTTTTGA AAAAATAA
 
Protein sequence
MNLPNQLTMA RIILIPIFMA LLLIQFPKGQ PIFPYQDFVA AMIFILAAAT DGLDGYIARK 
RGQVTVLGKF MDPLADKLLV SAALIALVDL GHVPAWICWI ILAREFAVTG LRAIASADGT 
VIAASKLGKI KTVSQVVAIS LILLHDWPLS LFNLYLGQPL LYVALFFTIV SGVDYLVKSK 
KLLKK