Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_3060 |
Symbol | |
ID | 7260071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 3279604 |
End bp | 3280725 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643562980 |
Product | VanW family protein |
Protein accession | YP_002459519 |
Protein GI | 219669084 |
COG category | [V] Defense mechanisms |
COG ID | [COG2720] Uncharacterized vancomycin resistance protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAGAA GGAAACCATG GGTCTTTCTT TTGGTAATTT TATTTAGTCA GCTTAGCTTA TCTATACTTT TGGGGGCTAC GGTAACCTAC GGTGCGGGTT ATGCGAAGGC ACCCGAGGGG TTGACGGTTT GGGAAAAAGA TCTGGGTGGG ATGACCAAGG ATGAGGCCTA TGCAGTCCTT GCCGAAGTAA TCCCCAAGGC AGTCGTCTAT GACCGGACGG TTTATTTCTT GGAGCTAAAC CAAACCGATC AAGATCTAAA GGACTATCTG GCAAGTCAAT ACATCATTTC CACCGGAAAT GTTATTACGG ATGCCTTTGA GTACCTGCAC AGAATGTCAA GGACTATCCC GTCTCCTGAG TTACTCAATC AGGAGGAAGT TCTTGCTCAG CTCCGCAAGT TCGCCCTGGA TATCGATCAG CCGGGTAAGG CGGCTGAAGC CTATTATGAG AATGGCGAGA TCGTCATCGA AGAGGGCAGT TTGGGAGTCA GACTTGATGT GGACAAATCA TGGGAACAAC TGCAGCAAAG CATAGGCATG GAGACGGTGC CGCTTGTTAC GGAGGTCATA GTGGTTCACC CTACTACGGC CGAATTAGAG AAGGTCAAAG ATCCCTTGGG GGATTACACC ACCTATTTTA ACCCTTCCTT TCATGAACGG GTTACCAATG TACGGCTTGC GGCTGAAGCG ATCAATGGAC TTATTCTTCC GCCGGGTGGT GAATTCTCCT TTAATGATAC GGTGGGAAAA CGTGAGCCTG AAAGAGGGTA TTTGCCGGCT TTAATGTATA TGGGCAATAG AGTTGTCACA GATGATGGCG GAGGGATTTG CCAGGATTCG ACCACTCTTT ATCAAGCGAC CAAACAGGCC AGGCTGGAAG TGCTGGAAAG ATACAGCCAT TCTCTGCCGG TTTCCTATGT TCCGTTGGGG CAGGATGCTA CGGTTGCTTA TGGAGCGCTG GATTTCCGCT TTCGGAACAC GACTCAGGGT TATTTGCTGC TTAATGCAGC TACAGGCGGC AATTGGATTC GGGTAAGAAT TTTCGGTGTG GCCGATTCTG AACACCCTGC CCTTGACGAA CCGGACGGTT ATCCTGTAAA ACCCAGAGAA TGGTCAAAGT AA
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Protein sequence | MLRRKPWVFL LVILFSQLSL SILLGATVTY GAGYAKAPEG LTVWEKDLGG MTKDEAYAVL AEVIPKAVVY DRTVYFLELN QTDQDLKDYL ASQYIISTGN VITDAFEYLH RMSRTIPSPE LLNQEEVLAQ LRKFALDIDQ PGKAAEAYYE NGEIVIEEGS LGVRLDVDKS WEQLQQSIGM ETVPLVTEVI VVHPTTAELE KVKDPLGDYT TYFNPSFHER VTNVRLAAEA INGLILPPGG EFSFNDTVGK REPERGYLPA LMYMGNRVVT DDGGGICQDS TTLYQATKQA RLEVLERYSH SLPVSYVPLG QDATVAYGAL DFRFRNTTQG YLLLNAATGG NWIRVRIFGV ADSEHPALDE PDGYPVKPRE WSK
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