Gene Dhaf_2894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2894 
Symbol 
ID7259902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp3102171 
End bp3103175 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content45% 
IMG OID643562812 
Productlipoyltransferase and lipoate-protein ligase 
Protein accessionYP_002459353 
Protein GI219668918 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0095] Lipoate-protein ligase A 
TIGRFAM ID[TIGR00545] lipoyltransferase and lipoate-protein ligase 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTGCC CGGTAAAAAC TAAAATTGTG CTGTCTGATT CATTTGATCC CTGGCACAAT 
CTGGCCTTGG AAGAATTCCT TTTACATAAG GTGGAGAAAG ATCAGATTCT CCTTTATCTA 
TGGCAAAATC AAAACACCGT AGTTATCGGA AGAAATCAAA ATCCCTGGCA GGAATGCCGC 
TGTACCCTTC TTGAAGAAGA TGGAGGAAAA CTGGCCCGTC GTCTTTCCGG GGGCGGGGCG 
GTTTTTCATG ATTTAGGCAA TCTCAATTTT ACCTTTATTA TGGATCGGGA GCTTTATGAT 
TTGCACAAAC AGCTCCAGGT TATCTTAGGG GGAGTAAACA GTTTAGGAAT TCAAGCCGAA 
TTTACCGGCC GCAATGATCT GACTGTGGAG GGAAAGAAGT TTTCGGGGAA TGCTTTCTAT 
TTTGAAAAAG ATAAAGCATA CCACCACGGT ACGGTTCTTG TTCATGTGGA CGGGGAAAAA 
GTGGGGAAAT ACCTTCAGGT ATCCAAGGAA AAAATGGCGG CCAAGGGAGT ACAGTCGGTT 
CAATCCCGGA TCACCAACCT CCGCAATTAT TTACCGGATT TGTCCATTGA GGAGATGAAG 
GGAACTCTGA TGGCAAGCTT TCAAAGCCTC TATGGTGCCT GTCCGGAGCC TCTGCGTATA 
AAGGATACGG ATTATGACCT GGGCGGACTT TATGAAAAAT ACGCTTCCTG GGATTGGCGC 
TACGGTAAGA CGCCCCAATT TGACCTTGTC CTGGAGACCC GTTTTCCCTG GGGAGGGATA 
GAATTAGGCT TTACTCTGCG CCAAGGCAAG ATTATTGGCT CAACCATCTA TTCTGATGCT 
ATGAATGCAC ACCTCATCCA GGAGATCAGT GCTTCATTTC TTAACCGGAC TCTGAATAGT 
AGTGAATTGC TTCTTGCCTT GGAATCACTT CAGGTTCAGG AAGAAGATCT GATGATTCTT 
CAGGATATGA AAGAATGGAT TGGCGAAAAG ATTAAAGACG TTTAA
 
Protein sequence
MSCPVKTKIV LSDSFDPWHN LALEEFLLHK VEKDQILLYL WQNQNTVVIG RNQNPWQECR 
CTLLEEDGGK LARRLSGGGA VFHDLGNLNF TFIMDRELYD LHKQLQVILG GVNSLGIQAE 
FTGRNDLTVE GKKFSGNAFY FEKDKAYHHG TVLVHVDGEK VGKYLQVSKE KMAAKGVQSV 
QSRITNLRNY LPDLSIEEMK GTLMASFQSL YGACPEPLRI KDTDYDLGGL YEKYASWDWR 
YGKTPQFDLV LETRFPWGGI ELGFTLRQGK IIGSTIYSDA MNAHLIQEIS ASFLNRTLNS 
SELLLALESL QVQEEDLMIL QDMKEWIGEK IKDV