Gene Dhaf_2854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2854 
Symbol 
ID7259862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3067340 
End bp3068512 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content49% 
IMG OID643562772 
Productprotein of unknown function DUF939 
Protein accessionYP_002459313 
Protein GI219668878 
COG category[S] Function unknown 
COG ID[COG4129] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0150016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGGGAAG GGGGATTTTC CCTGTTTTCT AAGCTTAAAA CTTGGTTTGG TCCAAGAATT 
CTTAAGACCG GACTGGGAGT AACCATTGCC ATATTAATCT GCCAGATAGC TTCAGTGGGG
CCGGCCAGCT TTGCCGCCAT TACGGTGGTC ATCAATATGC AGCCTTCCGT GAGCAAAGCC
CTTTCTAACG CCTGGGAACA GATCGCTGTT AATATTGTAG CTGTGGTACT GGCTATTGCG
GTGGGGCTGA CCGTGGGAAG CAACCCTTAT ATCATCGGCT TGGTTGTTAT CCTAATGATC
GCCGCTTCCA ACCGTATGGG GTGGCATGGT GTGAATTTAG GGATCGTATC CATCATCTTC
ATCCTGGATG CTCCTCCCGA CCAATTCCTG GAACATGCTA TTTCCCGGGC TTTGTGCATT
TTTATTGGCT TGGTGGTAGC TCTTACCATC AATCGGGTGC TTGCTCCGCC CCGCTATAAA
AAGAATTTCC GCAAAAAATT ATATGCCCTT GTCTATGACT CATCGGAGTT CTTTTTGGAC
AGCCTTAAGC ATTATGTGGA TTCGACATCC TTCAACAGCT ATGAAAAGGT AAAACCAACC
TTGCTGGAAA AGCAGTTGGA AGAAGTGACA GAGCTTTACG AACACGCCCG GGAGGAATTC
AGCTCCAAAG ACAAAATGCA GCTTATGGAG CGGCTTCTGG AGCTGTGCCG GGGATTTATC
GAGCGTGGGG AAAACATCGA AGAAATGACC CGTCAAAGAG TGAAACGGCG CCAGGCCCCT
GATTCTCCTC CCCAAATGGG TCAGGGAATA AGCAAGGAAT TCCAAAATCT TTTGGATTAT
ATCCTGGTTG GCAAAGGGAT CCTGGGAGCA CTGCGGGATA GTTTGTACCT CAGCTTTACC
TATGTTCCGG CCACGCCGCT GCAAACCCTT GATCAGGATT TTTGGAATGA GTTTGATCTA
AGGATGGATC AGTGGCAAAA GCATTTCAGC GGCGTGTACT TTCTGCGGGC CACCATGGAA
GTGGCTGTGG TGGCCACGGA AATGCGCTGG GCATCCAAGC GGATGAGAAG CAGTTACGAG
CTGAGCATTA AGAAGAACGA TTTGCAGCCT TTGGAAGAAT CCAAGCAGTT CCTGCAGGAA
AATCCGGGTG TTTCCGGCGG CCCTAAGGAA TAA
 
Protein sequence
MREGGFSLFS KLKTWFGPRI LKTGLGVTIA ILICQIASVG PASFAAITVV INMQPSVSKA 
LSNAWEQIAV NIVAVVLAIA VGLTVGSNPY IIGLVVILMI AASNRMGWHG VNLGIVSIIF
ILDAPPDQFL EHAISRALCI FIGLVVALTI NRVLAPPRYK KNFRKKLYAL VYDSSEFFLD
SLKHYVDSTS FNSYEKVKPT LLEKQLEEVT ELYEHAREEF SSKDKMQLME RLLELCRGFI
ERGENIEEMT RQRVKRRQAP DSPPQMGQGI SKEFQNLLDY ILVGKGILGA LRDSLYLSFT
YVPATPLQTL DQDFWNEFDL RMDQWQKHFS GVYFLRATME VAVVATEMRW ASKRMRSSYE
LSIKKNDLQP LEESKQFLQE NPGVSGGPKE