Gene Dhaf_2789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2789 
Symbol 
ID7259796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2993502 
End bp2994140 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content44% 
IMG OID643562707 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_002459249 
Protein GI219668814 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.246733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAGAG TCGTTATCGC AGATGATCAT CCGCTCCTTC GTGAGGGATT AAGACGAATT 
CTTGAATTTG AAGAAGGAAT CCAAGTTGTC TGTGAAGTAG GAGACGGCCA AGGTGCGATT
AATGTTTCAC GCACCTTGGA TTTTGATATT TTATTAATGG ATTTAAATAT GCCTGGGGTA
AATGGTTTGG AAGCCTGTCG TGTCATTCGC CGTGAAAACG AGACGATTGG CATTCTGGTG
CTGACTGTGG ATGATTCCGA TGAAAAAGTA TTTCAGGTTC TTCAATTGGG GGTTGCAGGC
TATCTGTTGA AAGATGTGGA TCCCAAGACC TTGATCGATT CCATTCGCAA AGTCCATTCG
GGCCAGCCGA TTCTTTCACC TGCAGTCACC GGTAAATTGC TGGGGCAGCT TGTTCATCCT
ACCCAGAACA GGGATACCTG TGGATTAAGT GACAGAGAAC TGCAAATCCT AACTTATGTG
GTTAAGGGGT CATCCAATCG TGAGATTGGA CAGGCCTTAT TCATCAGTGA AAAAACCGTC
AAAAATCATC TTTCCAGTAT TTTTCGCAAA CTGGCGGTGG AGGATCGCAC CCAAGCTGCG
CTCAAAGCAG TGAAACTTAA ACTTGTTCAA CTGGATTAA
 
Protein sequence
MIRVVIADDH PLLREGLRRI LEFEEGIQVV CEVGDGQGAI NVSRTLDFDI LLMDLNMPGV 
NGLEACRVIR RENETIGILV LTVDDSDEKV FQVLQLGVAG YLLKDVDPKT LIDSIRKVHS
GQPILSPAVT GKLLGQLVHP TQNRDTCGLS DRELQILTYV VKGSSNREIG QALFISEKTV
KNHLSSIFRK LAVEDRTQAA LKAVKLKLVQ LD