Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_2788 |
Symbol | |
ID | 7259795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 2991706 |
End bp | 2993418 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643562706 |
Product | beta-lactamase domain protein |
Protein accession | YP_002459248 |
Protein GI | 219668813 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTAT ATTTCTATGG AGCCGCTCAA GTCGTCACCG GATCATCTTA TCTGGTTGAA TCCGAAGGCT ATCGAGTCCT GATCGATTGT GGACTTTTTC AAGGCTCAAA AGCCTTGAAA GAGCTGAATT ATGGTGATTT TCCCTATAAT CCCGCGGAAC TTAATGCCGT GATCCTGACC CACGCTCATA CGGATCATTC GGGCTTAATT CCGAAGCTTA TCAAATATGG GTTTCAGGGA AAAATTTATG CCACCCCGGA AACCATAAAA TTGTGTTCGG TGATGCTCCC GGACAGCGGT CATATTCAAG AGATGGAAGT TGAGCGCAAA AACCGCAAGC TGAAACGGGC CAGTCAGGAT TTGCTAACCC CCATTTATAC TGCCCAAGAT GCTCAGGATT CCCTTAAATT CTTCACACCG GCTCAATATG ATCAAAGCAC TCAGCTTTCT CCGGAGATCA GCTTTACCTT TCACGATGCG GGCCATATCC TGGGTTCGGC ATTTGTCCAA ATGACAGTCA AGGAAGGTGA ACTGGAGAAG ACCCTTGTGT TCTCCGGGGA TGTGGGGAAT TCCGAGCAGC CCTTTATTGA GAATCCCCGG ATTATTTGCG GCGGAGACAT TGTCATTGTC GAAACAACTT ATGGGGATCG CCAGCATGAG AACAGGGCCA ATCGCATTCA GCATTTAGCC GAAATCATTC GCGAGGCTCA CCAAGCAGGG GGAAACCTTG TCATCCCGGC TTTTGCTATC GAACGTACGC AAGACCTTTT GTTTTATATA CGTAAACTGC AGACTGAAAA CGAGATTCCG GTGATGCCTA TTTATGTGGA TAGTCCCTTG GCCATCGCCG CGACCAAGAT TTTTCAGGAA AATCCTCAGA ATTTCGATCA GGAGACTTTG GATATGATCC AAAGGGGTGA GCACCCCTTA TTGATGCCCA ATGTTCATTA TAGCTTAACC AGCGAAGATT CCATGGCCAT CAACTCTATT CAGGGCGGCG CCATCATCAT TGCCGCCAGC GGTATGGCTG ACGCCGGGCG GATTAAGTAT CATCTCAAAT ATAACCTATG GCGGGAAAAT GCCACCGTTT TATTTGTCGG CTACCAAGCC CAGGGAACGT TGGGGCGGAG AATTATTGAA GGAGCCAAAG AGGTAACCAT TCATGGGGAA AAGGTGGCTG TGCGCGCCAA TATCCGCCGC ATGGAAGGTC TATCAGCCCA TGCCGATCAG CCCCAGCTCC TGGAATGGTT GTCCTGTCTG GGTGAGGATG CCGAAAATAT TATCTTAGTC CACGGTGAAC CTGATGTCCA AAAAACCTTT GCCCAGAAGA TTCAAGAGAA GTTTGGGAAA ATCCCCTGGA TTCCCCAGTT GGGCGAAGTA TTGGAAATTA AGAACAGGGA AGTTATCCCC TATCCGCCGT CAAAACCCTG GCTGCAGGTC ATCGAGGCGG AAGCCCAACA AGCCTCAGAA ACCAGGCAGG CTATGGCTCA TGGCGGAGCA GAAGTAGCTC AGCTTCCGAC CTTAAGCAGG GGAAAATCCG GTCAGGCTAA GATTACTCAG GCTCAGATTA ATAGGGCAAT GCAGCGGCTT CGCCATCGTT TAAAGGTTCT GGTGGATAAC GGAAGGCGGT CGAATAATCT GGAGCATACC TTAGCTGTTA TCGATACCAT CACCCGCTGG CTGGACGATA TGGACAACAA GAAAAAGAAG TAG
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Protein sequence | MKLYFYGAAQ VVTGSSYLVE SEGYRVLIDC GLFQGSKALK ELNYGDFPYN PAELNAVILT HAHTDHSGLI PKLIKYGFQG KIYATPETIK LCSVMLPDSG HIQEMEVERK NRKLKRASQD LLTPIYTAQD AQDSLKFFTP AQYDQSTQLS PEISFTFHDA GHILGSAFVQ MTVKEGELEK TLVFSGDVGN SEQPFIENPR IICGGDIVIV ETTYGDRQHE NRANRIQHLA EIIREAHQAG GNLVIPAFAI ERTQDLLFYI RKLQTENEIP VMPIYVDSPL AIAATKIFQE NPQNFDQETL DMIQRGEHPL LMPNVHYSLT SEDSMAINSI QGGAIIIAAS GMADAGRIKY HLKYNLWREN ATVLFVGYQA QGTLGRRIIE GAKEVTIHGE KVAVRANIRR MEGLSAHADQ PQLLEWLSCL GEDAENIILV HGEPDVQKTF AQKIQEKFGK IPWIPQLGEV LEIKNREVIP YPPSKPWLQV IEAEAQQASE TRQAMAHGGA EVAQLPTLSR GKSGQAKITQ AQINRAMQRL RHRLKVLVDN GRRSNNLEHT LAVIDTITRW LDDMDNKKKK
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