| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2788 |
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| Symbol | |
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| ID | 7259795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 2991706 |
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| End bp | 2993418 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643562706 |
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| Product | beta-lactamase domain protein |
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| Protein accession | YP_002459248 |
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| Protein GI | 219668813 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTAT ATTTCTATGG AGCCGCTCAA GTCGTCACCG GATCATCTTA TCTGGTTGAA
TCCGAAGGCT ATCGAGTCCT GATCGATTGT GGACTTTTTC AAGGCTCAAA AGCCTTGAAA
GAGCTGAATT ATGGTGATTT TCCCTATAAT CCCGCGGAAC TTAATGCCGT GATCCTGACC
CACGCTCATA CGGATCATTC GGGCTTAATT CCGAAGCTTA TCAAATATGG GTTTCAGGGA
AAAATTTATG CCACCCCGGA AACCATAAAA TTGTGTTCGG TGATGCTCCC GGACAGCGGT
CATATTCAAG AGATGGAAGT TGAGCGCAAA AACCGCAAGC TGAAACGGGC CAGTCAGGAT
TTGCTAACCC CCATTTATAC TGCCCAAGAT GCTCAGGATT CCCTTAAATT CTTCACACCG
GCTCAATATG ATCAAAGCAC TCAGCTTTCT CCGGAGATCA GCTTTACCTT TCACGATGCG
GGCCATATCC TGGGTTCGGC ATTTGTCCAA ATGACAGTCA AGGAAGGTGA ACTGGAGAAG
ACCCTTGTGT TCTCCGGGGA TGTGGGGAAT TCCGAGCAGC CCTTTATTGA GAATCCCCGG
ATTATTTGCG GCGGAGACAT TGTCATTGTC GAAACAACTT ATGGGGATCG CCAGCATGAG
AACAGGGCCA ATCGCATTCA GCATTTAGCC GAAATCATTC GCGAGGCTCA CCAAGCAGGG
GGAAACCTTG TCATCCCGGC TTTTGCTATC GAACGTACGC AAGACCTTTT GTTTTATATA
CGTAAACTGC AGACTGAAAA CGAGATTCCG GTGATGCCTA TTTATGTGGA TAGTCCCTTG
GCCATCGCCG CGACCAAGAT TTTTCAGGAA AATCCTCAGA ATTTCGATCA GGAGACTTTG
GATATGATCC AAAGGGGTGA GCACCCCTTA TTGATGCCCA ATGTTCATTA TAGCTTAACC
AGCGAAGATT CCATGGCCAT CAACTCTATT CAGGGCGGCG CCATCATCAT TGCCGCCAGC
GGTATGGCTG ACGCCGGGCG GATTAAGTAT CATCTCAAAT ATAACCTATG GCGGGAAAAT
GCCACCGTTT TATTTGTCGG CTACCAAGCC CAGGGAACGT TGGGGCGGAG AATTATTGAA
GGAGCCAAAG AGGTAACCAT TCATGGGGAA AAGGTGGCTG TGCGCGCCAA TATCCGCCGC
ATGGAAGGTC TATCAGCCCA TGCCGATCAG CCCCAGCTCC TGGAATGGTT GTCCTGTCTG
GGTGAGGATG CCGAAAATAT TATCTTAGTC CACGGTGAAC CTGATGTCCA AAAAACCTTT
GCCCAGAAGA TTCAAGAGAA GTTTGGGAAA ATCCCCTGGA TTCCCCAGTT GGGCGAAGTA
TTGGAAATTA AGAACAGGGA AGTTATCCCC TATCCGCCGT CAAAACCCTG GCTGCAGGTC
ATCGAGGCGG AAGCCCAACA AGCCTCAGAA ACCAGGCAGG CTATGGCTCA TGGCGGAGCA
GAAGTAGCTC AGCTTCCGAC CTTAAGCAGG GGAAAATCCG GTCAGGCTAA GATTACTCAG
GCTCAGATTA ATAGGGCAAT GCAGCGGCTT CGCCATCGTT TAAAGGTTCT GGTGGATAAC
GGAAGGCGGT CGAATAATCT GGAGCATACC TTAGCTGTTA TCGATACCAT CACCCGCTGG
CTGGACGATA TGGACAACAA GAAAAAGAAG TAG
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| Protein sequence | MKLYFYGAAQ VVTGSSYLVE SEGYRVLIDC GLFQGSKALK ELNYGDFPYN PAELNAVILT
HAHTDHSGLI PKLIKYGFQG KIYATPETIK LCSVMLPDSG HIQEMEVERK NRKLKRASQD
LLTPIYTAQD AQDSLKFFTP AQYDQSTQLS PEISFTFHDA GHILGSAFVQ MTVKEGELEK
TLVFSGDVGN SEQPFIENPR IICGGDIVIV ETTYGDRQHE NRANRIQHLA EIIREAHQAG
GNLVIPAFAI ERTQDLLFYI RKLQTENEIP VMPIYVDSPL AIAATKIFQE NPQNFDQETL
DMIQRGEHPL LMPNVHYSLT SEDSMAINSI QGGAIIIAAS GMADAGRIKY HLKYNLWREN
ATVLFVGYQA QGTLGRRIIE GAKEVTIHGE KVAVRANIRR MEGLSAHADQ PQLLEWLSCL
GEDAENIILV HGEPDVQKTF AQKIQEKFGK IPWIPQLGEV LEIKNREVIP YPPSKPWLQV
IEAEAQQASE TRQAMAHGGA EVAQLPTLSR GKSGQAKITQ AQINRAMQRL RHRLKVLVDN
GRRSNNLEHT LAVIDTITRW LDDMDNKKKK
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