Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_2685 |
Symbol | |
ID | 7259692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 2890164 |
End bp | 2891366 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643562605 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002459147 |
Protein GI | 219668712 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0160306 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAGA AGAAACAATC TCTAGTATTA TTGGCCATTT TTTCATTTGC GTTTATCGCG ATGGGCGTTG GGACGATTAC ACCTGCCATA GCTGCGATTG GAGCAGCCTT TCCCCAGATT GGTTTCAGCA CTTTATTATT AGTTTCCACA ATTCCTTCCC TTGTTTCAAT TCCGGTAGCG ATTATCGGCG GCAGCATTGC CGGCAAATCG GTTAAGTACA GAACTTTAGT GCTCTTTGCA GCCCTGATGT TCACCATTGG CGGTATAATT CCCTATTTCA TAAATGATTT TACTCTGATC CTGGTATCCA GAGCCTTCTT TGGTTTAGGG CTCGGTCTGA TCATGCCCCT TAATACCGCT TTGATTTTCA ATCTTATCCC ACCGGATAAG CAGGCCAATA TTATGGGAAT CAACGGCGTG GTCATGAATA TCGGCGGGAT TGTCCTGCAA TTGCTGGGTG GCGTTTTTGC TTCAGTTCAA TGGAATTACA GCTTCCTGGC CCACGGTTTT GGTTTAATCA CATTTTTGCT CACTTTATTC TTCCTGCCCG AACCTAAAAA GCATGAACTT CCTGCAGGTA CGGCAGATGC CCCGGCCCAA AAACTAAAAA TGCCTGTTTC CATCTTTGGC TGGGGAATTG CCTTTGGAGT CGCCACCATC CTCTACTACC CATCTCTGAC CAATATGTCT TCTGTTCTTG AAACTATCGG AGCCAATTCC GCAGTGGCCG GGATCGTCTT AATGTTCATG ACCATAGGCG GCATGCTGGC AGGAATAGTT TTTGGCAAAA CCTTTAAAAA GTTTGGCCGG CAGACTCTCA GTTTCGGCCT GTTCTTTTTC GTCTTATCCC AAGTCCTCTT TGCCTTCAGC CAGAGTGTGC CCCTCTTTAT TATCGGTGAA GCGCTGATGG GATTTGGCTT GACTCTCACC ATGACCTCCA TCAATATGAT GGCCGGAGCC TCCGTACACC CCAGCCAGAC CCCGATGGCC ATGTCCATTA TTGTCACCGG CATGAACCTG GGCGGTTTCC TTTCCGGCTA TATCTACGCT GCCGTTATGG GAACCTTGGG TATCACAACC CTGAGATTCC AATATTACAG CGGCATAGTC GGGTTTGCGG CTCTCCTGAT CTTCTTTTTG GTTCTCTTTT CAATGAAAAA ACCGGCAGCG CCGGTTGGTC CTTCCCAGGC AAGTTCTCAT TAG
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Protein sequence | MSEKKQSLVL LAIFSFAFIA MGVGTITPAI AAIGAAFPQI GFSTLLLVST IPSLVSIPVA IIGGSIAGKS VKYRTLVLFA ALMFTIGGII PYFINDFTLI LVSRAFFGLG LGLIMPLNTA LIFNLIPPDK QANIMGINGV VMNIGGIVLQ LLGGVFASVQ WNYSFLAHGF GLITFLLTLF FLPEPKKHEL PAGTADAPAQ KLKMPVSIFG WGIAFGVATI LYYPSLTNMS SVLETIGANS AVAGIVLMFM TIGGMLAGIV FGKTFKKFGR QTLSFGLFFF VLSQVLFAFS QSVPLFIIGE ALMGFGLTLT MTSINMMAGA SVHPSQTPMA MSIIVTGMNL GGFLSGYIYA AVMGTLGITT LRFQYYSGIV GFAALLIFFL VLFSMKKPAA PVGPSQASSH
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