Gene Dhaf_2685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2685 
Symbol 
ID7259692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2890164 
End bp2891366 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content48% 
IMG OID643562605 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002459147 
Protein GI219668712 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0160306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGA AGAAACAATC TCTAGTATTA TTGGCCATTT TTTCATTTGC GTTTATCGCG 
ATGGGCGTTG GGACGATTAC ACCTGCCATA GCTGCGATTG GAGCAGCCTT TCCCCAGATT
GGTTTCAGCA CTTTATTATT AGTTTCCACA ATTCCTTCCC TTGTTTCAAT TCCGGTAGCG
ATTATCGGCG GCAGCATTGC CGGCAAATCG GTTAAGTACA GAACTTTAGT GCTCTTTGCA
GCCCTGATGT TCACCATTGG CGGTATAATT CCCTATTTCA TAAATGATTT TACTCTGATC
CTGGTATCCA GAGCCTTCTT TGGTTTAGGG CTCGGTCTGA TCATGCCCCT TAATACCGCT
TTGATTTTCA ATCTTATCCC ACCGGATAAG CAGGCCAATA TTATGGGAAT CAACGGCGTG
GTCATGAATA TCGGCGGGAT TGTCCTGCAA TTGCTGGGTG GCGTTTTTGC TTCAGTTCAA
TGGAATTACA GCTTCCTGGC CCACGGTTTT GGTTTAATCA CATTTTTGCT CACTTTATTC
TTCCTGCCCG AACCTAAAAA GCATGAACTT CCTGCAGGTA CGGCAGATGC CCCGGCCCAA
AAACTAAAAA TGCCTGTTTC CATCTTTGGC TGGGGAATTG CCTTTGGAGT CGCCACCATC
CTCTACTACC CATCTCTGAC CAATATGTCT TCTGTTCTTG AAACTATCGG AGCCAATTCC
GCAGTGGCCG GGATCGTCTT AATGTTCATG ACCATAGGCG GCATGCTGGC AGGAATAGTT
TTTGGCAAAA CCTTTAAAAA GTTTGGCCGG CAGACTCTCA GTTTCGGCCT GTTCTTTTTC
GTCTTATCCC AAGTCCTCTT TGCCTTCAGC CAGAGTGTGC CCCTCTTTAT TATCGGTGAA
GCGCTGATGG GATTTGGCTT GACTCTCACC ATGACCTCCA TCAATATGAT GGCCGGAGCC
TCCGTACACC CCAGCCAGAC CCCGATGGCC ATGTCCATTA TTGTCACCGG CATGAACCTG
GGCGGTTTCC TTTCCGGCTA TATCTACGCT GCCGTTATGG GAACCTTGGG TATCACAACC
CTGAGATTCC AATATTACAG CGGCATAGTC GGGTTTGCGG CTCTCCTGAT CTTCTTTTTG
GTTCTCTTTT CAATGAAAAA ACCGGCAGCG CCGGTTGGTC CTTCCCAGGC AAGTTCTCAT
TAG
 
Protein sequence
MSEKKQSLVL LAIFSFAFIA MGVGTITPAI AAIGAAFPQI GFSTLLLVST IPSLVSIPVA 
IIGGSIAGKS VKYRTLVLFA ALMFTIGGII PYFINDFTLI LVSRAFFGLG LGLIMPLNTA
LIFNLIPPDK QANIMGINGV VMNIGGIVLQ LLGGVFASVQ WNYSFLAHGF GLITFLLTLF
FLPEPKKHEL PAGTADAPAQ KLKMPVSIFG WGIAFGVATI LYYPSLTNMS SVLETIGANS
AVAGIVLMFM TIGGMLAGIV FGKTFKKFGR QTLSFGLFFF VLSQVLFAFS QSVPLFIIGE
ALMGFGLTLT MTSINMMAGA SVHPSQTPMA MSIIVTGMNL GGFLSGYIYA AVMGTLGITT
LRFQYYSGIV GFAALLIFFL VLFSMKKPAA PVGPSQASSH