| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2569 |
|---|
| Symbol | |
|---|
| ID | 7259540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 2771495 |
|---|
| End bp | 2772610 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643562454 |
|---|
| Product | Uroporphyrinogen decarboxylase (URO-D) |
|---|
| Protein accession | YP_002459032 |
|---|
| Protein GI | 219668597 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000000262106 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAACA GTCAGTTATA TAAGGAACGG AAAGAAAGAA TAGCGAAAGC CGTGGCTCTC
GGGAAAACGG ATCGGACTCC TGTGGTGCTC GAATTTGCAG CCTTTGCAGC CCGGGCTCAA
ACTATGTCGG TGGCTGAATT TATAAGCAGC AGCTTAGTTT CGGCCGAAGC CATGATTAAA
ACTGTGGAAA AAGTCGGCGG GGCGGACGGT GTCGATTATG GAAGCTACTT TAAATATGGG
CTGGAAATGG CCTGGCTAAG TAAGATCAAA CGGCCGGGAG AGGAACTCCC GGAAAATGAG
TTGTGGCAGG TCGTTGAGGC CGAATTGATG AAGCAGAGTG ACTATGATCG GATTGTTGAA
GAAGGCTGGC CCAACTGGCT GATGTCCTAT GTAACAGAAC ACTTTGGTCC TGAATTGCTC
CCGCAAATTA TGGCTGATGG ACAAAATGCC TCCAAGGTGG CCGAGATGTG GAAAGAAGCC
GGTATTCCTA CCTTGACAGG CGGTGGGGGT GTAACAACAA TCCCCTATGA AATGTTCTGT
GGCGGCCGTT CATTTTCTAA ATTTGTGCGG GATATGTTTA AAATACCGGA CAAGGTGCAG
GCTGCCATGG ATGCCGCTTT ACCTTTCATG GCTCCTCAAA GTATAGCAGG GTCTAAACAA
CTGGGTTCAG AGTATCTCTG GCTGGGGGGC TGGCGGGCAG CCAGTGAAAT GCTGTCTCAG
GCCCAATGGG ATCGCTTTGT TTTCCCGTAT TATGAGAAAC TGATTTATGA AATCCTTGAC
GCCGGAATTA CCCCTATTCT TCACTTTGAT TCTGATTGGA CCCGGGACTT GGCGCGCTTC
AAAGATTTCC CGAAGGGAAA AATCATTCTG GAGCTTGATG GCATGACCGA TATCTATAAG
GCCAAAGAAA TATTGGGAGA TACCATGTGT ATTATGGGTG ATGTACCCGC GGCCCTGCTT
ACCCTGGGAA CGCCGGATGC TGTTCATAAC TACTGCCGGA AATTGATCGA AGAAATAGGT
CCCACAGGGT TTATCCTCCA CCCAGGCTGT GATATTCCTA TTGATGCCAA AATAGAAAAT
GTTCAAGCCA TGGTGGCGTC TGTAACCTCT AAATAA
|
|---|
| Protein sequence | MSNSQLYKER KERIAKAVAL GKTDRTPVVL EFAAFAARAQ TMSVAEFISS SLVSAEAMIK
TVEKVGGADG VDYGSYFKYG LEMAWLSKIK RPGEELPENE LWQVVEAELM KQSDYDRIVE
EGWPNWLMSY VTEHFGPELL PQIMADGQNA SKVAEMWKEA GIPTLTGGGG VTTIPYEMFC
GGRSFSKFVR DMFKIPDKVQ AAMDAALPFM APQSIAGSKQ LGSEYLWLGG WRAASEMLSQ
AQWDRFVFPY YEKLIYEILD AGITPILHFD SDWTRDLARF KDFPKGKIIL ELDGMTDIYK
AKEILGDTMC IMGDVPAALL TLGTPDAVHN YCRKLIEEIG PTGFILHPGC DIPIDAKIEN
VQAMVASVTS K
|
|---|
| |