Gene Dhaf_2371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2371 
Symbol 
ID7259340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2558678 
End bp2559955 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content49% 
IMG OID643562256 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002458836 
Protein GI219668401 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAC CCAAACCAGG CCAAAAGCCC CACTATGGCG GTGCAGTTAA AGCCGCCGTG 
TTATCCATCA TGCTGCTGCA GTACTTACAG GCTTTGACCT CACCGGCTGC CGGTGCTATT
TTGAAGCATT TCGAGCAATT TGGGTACACT TCACTGGACA TTAAACAAAT TCAGACCATC
CCGACTTTGG TCATGATCTT TGCCTGTATG GCAATTATCC CTATGGCCAA TAAGCTGCGC
AAGAAAACAA TTCTTAAAAT TGCCATGGCC TTGATTTTTT TTGGTGGAAT CGCACCAGGG
ATCGGACCGG ACAGCATGAT GTTCATCTAT GCTTGCCGGG TGGTTTTTGG CTGTGGTTAT
GGTATGATTT ATGCTTTAGC CTCTTCATTT ATTGTTGATC TTTTTGACGG CCCTGAACAA
AAACAAATGA TGGGCTGGAA GACGGCTGCC GGTTCGATTG GCGGTATTAT CTTTCAGACC
GTGGGCGGCT TTTTGGCGGC GATGTACTGG AAATATGCTT TCCTGGGCTT TCTCGTGGCG
CTGCCCTTTA TCTTATTGAT TTTATGGAAA TGCCCGGACC CCTCCGGGCT GGAGGAATTT
AACCCGGCAA AAGAAGCCGG CCGGCCCAAA GCAAAGGTGG AAAAGGGCCA TTGGTTCGTC
ATTGTTCTGG CCGCTCTGAA TGTGATGATC TTCTCTTCGT TTATGATCAA TATGCCCATC
GTGATTATGA CCGAAGGACT GGGGACTCCG AATACCATTG CTTTAGTTAT GAATCTTTTT
ACTGTGGGAA TTTTCCTGGG CAGCTTCACC TACGGCTGGA CCACTAAACT ATTGAAGCGA
TTTGACATAC CCTTCACCAT CCTGGTTTAT GGTATCGTCC TGGTGATCCT GCCCCGTTTC
GTCACCTTGC CGGTCTATAT GATCTGTGCT TTGATCTTTG GCTGGGCTTT TGGCGCCTAC
AACCCCAGTC TGGTTCTGGC CGTATCCCGT CAGGGGAGCG CTCTGGCAGC TACCGCAGCC
ATTGCTTTCT TCGTTGCCGG GCAAGGGCTG GGACAGTTTA TCCAACCTTA CTTTATGCTG
CTTACGGGAG TTTTTGGGCT TAACGAACCT TGGGGTGAAC TGGCTCCCTG GGTTATGGCA
GGTCCCATGC TCATTGCTAT TTCCATCTGT AGTTTTATTT GGGTTGTCAA AATTACCAAC
AGGAAATTCC CCTATGAAGG GAATGTCAAA GCTGTGGGTA AGGCAGATCA GACCATGGAG
AGTCCGCTGG ACAGTTAA
 
Protein sequence
MSEPKPGQKP HYGGAVKAAV LSIMLLQYLQ ALTSPAAGAI LKHFEQFGYT SLDIKQIQTI 
PTLVMIFACM AIIPMANKLR KKTILKIAMA LIFFGGIAPG IGPDSMMFIY ACRVVFGCGY
GMIYALASSF IVDLFDGPEQ KQMMGWKTAA GSIGGIIFQT VGGFLAAMYW KYAFLGFLVA
LPFILLILWK CPDPSGLEEF NPAKEAGRPK AKVEKGHWFV IVLAALNVMI FSSFMINMPI
VIMTEGLGTP NTIALVMNLF TVGIFLGSFT YGWTTKLLKR FDIPFTILVY GIVLVILPRF
VTLPVYMICA LIFGWAFGAY NPSLVLAVSR QGSALAATAA IAFFVAGQGL GQFIQPYFML
LTGVFGLNEP WGELAPWVMA GPMLIAISIC SFIWVVKITN RKFPYEGNVK AVGKADQTME
SPLDS