| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2311 |
|---|
| Symbol | |
|---|
| ID | 7259280 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 2495772 |
|---|
| End bp | 2496968 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643562198 |
|---|
| Product | aspartate aminotransferase |
|---|
| Protein accession | YP_002458778 |
|---|
| Protein GI | 219668343 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000000726355 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCCA GGACCATGCA ACAGCAGGTT AACAGTTCCT CGATTATTCG GGCGATGTTT
GAAGAAGGAA AACGCTTGTC AGCTCTATAC GGAGCTGACA ATGTCTATGA TTTTAGTTTG
GGCAATCCTA ATGTGGAGCC GCCTGCTGAA GTAAAGCAAG CCATTATGGA CATTTTAAAT
GAAGAGAATT CCACAACCGT TCACGGCTAT ATGAATAATT CCGGCTTTGA AGATGTGCGG
GGAGCCATCG CCGCTTCCCT TAACCAACGA TTCGCCACAG GGTTTGCAGC TGATAATATT
CTCATGACGG TAGGCGCAGC CGGAGGCTTA AATGTTATCT TCAAAACCCT GCTCAACCCG
GAGGATGAGG TGCTTACCTT TGCTCCTTTT TTTGGCGAGT ACCGCAACTA TGTTCAAAAC
TATCAGGGCC AGCTGATCGT GGTTTCGCCC AATACCAAGG ATTTCCAACC TAATCTGGAG
GAGCTTAAGG AGAAGATTAG TCCAAGGACC AAAGCTGTTC TGATTAATTC TCCCAACAAC
CCCACGGGTG TGGTTTATTC AGCGGAAACC ATAGCTGCTT TGGTGGATAT TCTCCGAGCA
AAGCAGGAGG AGTATGGCAC AGTGATCTAT CTGATCGGAG ATGAGCCCTA TCGGGAGCTG
GCCTATGATC AGGTGGAAGT GCCCTATCTG ACCAAGTATT ATGAGAACAC CATCGTCGGC
TATTCCTACA GCAAATCCCT CTCCTTACCG GGAGAGAGAA TCGGTTATCT GGTGATTCCG
CGGGAGGCTG CGGATTATGA GAATTTGATC GCCGCCGCCA ATATAGCCAA TCGCATTCTC
GGGTTTGTCA ATGCTCCTTC CCTTTTCCAG AGGGTTATCG CCAAATGCCT TGATGCCCAG
GTTAACCTTG ACAGCTACAA CCGGAACCGG GAGCTGCTCT ATAATGCCCT GGTATCCTAC
GGCTATCAGT GCATTAAACC CGAGGGGGCC TTTTACTTAT TCATTAAAAC TCCCCTAGAG
AATGATCTTG AGTTTTGCAC CCTGGCCAAG AGTAAAAATA TTCTCATCGT TCCGGGCACT
TCCTTTGCCT GCCCGGGATA TGCCCGGATT GCTTATTGTG TGGCTTATGA AACCATTGAG
AGGGCTCTGC CGGGATTCGA AGCGTTGATT AATGAAGTGA GCTGGGCCTC AGCATAG
|
|---|
| Protein sequence | MISRTMQQQV NSSSIIRAMF EEGKRLSALY GADNVYDFSL GNPNVEPPAE VKQAIMDILN
EENSTTVHGY MNNSGFEDVR GAIAASLNQR FATGFAADNI LMTVGAAGGL NVIFKTLLNP
EDEVLTFAPF FGEYRNYVQN YQGQLIVVSP NTKDFQPNLE ELKEKISPRT KAVLINSPNN
PTGVVYSAET IAALVDILRA KQEEYGTVIY LIGDEPYREL AYDQVEVPYL TKYYENTIVG
YSYSKSLSLP GERIGYLVIP REAADYENLI AAANIANRIL GFVNAPSLFQ RVIAKCLDAQ
VNLDSYNRNR ELLYNALVSY GYQCIKPEGA FYLFIKTPLE NDLEFCTLAK SKNILIVPGT
SFACPGYARI AYCVAYETIE RALPGFEALI NEVSWASA
|
|---|
| |