Gene Dhaf_2282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2282 
Symbol 
ID7259251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp2466128 
End bp2466694 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content44% 
IMG OID643562169 
Product2'-5' RNA ligase 
Protein accessionYP_002458749 
Protein GI219668314 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00000000216572 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGGATC AAAACATCAG AGCCTTTCTG GGAATTGACT TTACCGAGGA AGTGAAAGAT 
GAAATCCATG AATTGCAGCA GAACTTGAAA GGTTATGCCT TAAAAGGGCG ATGGAAGGGG 
CGGGATAATT TTCATCTTAC CTTAAAGTTT TTGGCTCAAA TCTCTTTTGC TCAAAAAGCT 
CAGATAGATG AATCCCTGCA GAGCTTATGC CGCAAGGAAA AACCCTTTAA TTTAGAGTTG 
AAGGGTCTGG GAGTATTCGG CGGCAAAGAA TCCTGCCGGG TGCTATGGCT GGGCTTAGCC 
GGTGATATGC AGGATTTGAG ATCCCTCCAT AAAAAAGTGG ATCAGGTTCT GACCCCTCTG 
GGCTTTCCTC CCGAAAGAAG GCCCTTTAGT CCACATATTA CTCTGGGACA GGATATTGTG 
TTTGCAGGCG GTTTTGAGGA AATCCAGGCA AAGGTCGGAG GTTTTGAGTT CACTCCAACT 
CATGTAGAAA GGATTCACCT CTTTAAAAGT GAGCAAGTTC AGTTCAAAAG AATCTATACA 
AAGCTCGCGG ATTATTCCCT GGGTTAA
 
Protein sequence
MVDQNIRAFL GIDFTEEVKD EIHELQQNLK GYALKGRWKG RDNFHLTLKF LAQISFAQKA 
QIDESLQSLC RKEKPFNLEL KGLGVFGGKE SCRVLWLGLA GDMQDLRSLH KKVDQVLTPL 
GFPPERRPFS PHITLGQDIV FAGGFEEIQA KVGGFEFTPT HVERIHLFKS EQVQFKRIYT 
KLADYSLG