| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2270 |
|---|
| Symbol | |
|---|
| ID | 7259239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 2452841 |
|---|
| End bp | 2454154 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643562157 |
|---|
| Product | branched-chain amino acid transport system II carrier protein |
|---|
| Protein accession | YP_002458737 |
|---|
| Protein GI | 219668302 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1114] Branched-chain amino acid permeases |
|---|
| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000000730131 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTTT CCAGCAAGGA CATTTTAATT ACAGGATTCG CACTCTTAGC TATGTTTTTT
GGGGCAGGCA ACCTAATTTT TCCGCCTATG CTTGGTTTGC AAAGTGGAGA TCAGCTTTCC
TGGGCTTTAT TGGGTTTTAT TGCTACAGGA GTTGGCTTAC CTTTTTTAGG AGTAACTGCG
GTGGCGAAAG CCGGCGGGGA TTTGGAATTG CTCGCTAATC GGGTTCACCC TGCCTTCAGT
AAAATGATCA CGACGATTTC TGTTCTCTGT ATCGGCCCCC TTCTGGCTAT TCCCAGGACC
GCCGCCACAA CTTATGAAGT AGCGATTGCT CCTGTGACCC AGTCCATCCA TCCTCAGCTG
GCTTTATTGC TGACATCGGT TGTCTTTTTT ATCATTGTCT TATTTTTTGT CCTAAGGCCG
GCGAAAATTC TTGATAGTGT GGGTAAAATA CTTACTCCCT TTATGCTGGT TTTTTTAACC
CTGATCATTT ATGTCGGAGT CACCCATCCT TTAGGAACGA TGGCTCAAAG CAGCTATACC
AATCCCTTTT CCCAAGGGTT TTTAGAAGGT TACAATACCA TGGATGCTAT CGCCTCGGTG
ATTTTTGGTA TGATCATTGT TAAAGGGATC AAAGATAAAG GGGTTACCGA TAACAATCAA
ATCGCCAGAA TCACTATCAT AGCAGGGATG ATTGCGGCAG CGGGCCTGGG CTTTATCTAC
ATTGGCTTAG CATATATCGG AGCTACGACG GGAACCTTAT TTACCGGTAC CAATCATGGG
CAGATGCTGA TCTTTGTCAG TGAATCCCTG TTAGGGGTCC TGGGCCGGAC GGTTATTGGT
GTCGTGATGG CTCTGGCCTG TCTCACTACG GCGATTGGAC TGGTGGCCAG CTGCGGAGAA
TATTTCAGCC GTTTAACCCA TAACCGGGTA AGCTATAATA CCGTAGCAAT CATTACCACT
TTGGTCAGCT TTATTTTGGC GAATATGGGC TTAGCTAACA TTCTGAAGAT ATCCGTACCG
CTCTTGGAGT TCGTCTATCC GATCATTATT GTGCTGATTA TGCTTGCTCT TCTTCATAAC
TTCTATAAAG GCAAGCGGGC AGTTTATGTA TGGACAACGG GCATTATTGT ACTCTTCGTC
ATCCTTGATA CTCTCTATGA TTTGGGAGCA TCCCTGGGGA TTAATCTCGC CTTTATCCGG
GATGGACTGA ATCTGCTGCC TTTCTATCAT TTAGGTTTGG GGTGGCTGGT CCCCGCTGTA
CTCACCTTAG TTTTAAGTGT AGTCTTTACT GCCAATAAAT CCGTCAAGGC CTAG
|
|---|
| Protein sequence | MKLSSKDILI TGFALLAMFF GAGNLIFPPM LGLQSGDQLS WALLGFIATG VGLPFLGVTA
VAKAGGDLEL LANRVHPAFS KMITTISVLC IGPLLAIPRT AATTYEVAIA PVTQSIHPQL
ALLLTSVVFF IIVLFFVLRP AKILDSVGKI LTPFMLVFLT LIIYVGVTHP LGTMAQSSYT
NPFSQGFLEG YNTMDAIASV IFGMIIVKGI KDKGVTDNNQ IARITIIAGM IAAAGLGFIY
IGLAYIGATT GTLFTGTNHG QMLIFVSESL LGVLGRTVIG VVMALACLTT AIGLVASCGE
YFSRLTHNRV SYNTVAIITT LVSFILANMG LANILKISVP LLEFVYPIII VLIMLALLHN
FYKGKRAVYV WTTGIIVLFV ILDTLYDLGA SLGINLAFIR DGLNLLPFYH LGLGWLVPAV
LTLVLSVVFT ANKSVKA
|
|---|
| |