Gene Dhaf_2230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2230 
Symbol 
ID7259199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2409328 
End bp2410812 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content53% 
IMG OID643562119 
Producthistidine kinase 
Protein accessionYP_002458699 
Protein GI219668264 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAATA AATCCCCAAC CCGTCCTCCT GGCCGCATTC GTAACAAAAT GCGGTTTTCC 
ATCGTCTGGA AACTGAATAT CAAGCTCTTC TTCCGGTTGT TTTGGATATT TATAAATCTG
AACATCTGTC TTATTCTTAT ATCCGCAGTC GGGCTGTTTG TCCATGCTGA ACAGACCGCA
GGAACAGTTG CTGAAAAGCT GACTCAGGCA GGACCGCCGC CCCCTCTGGA GGTGGACGAT
TGGCTTGAGC TTACCCCAAT TCGTATTGAG CATAGTGCCG CAGAACCGGA GGGATTCCGC
ATTCCTTCCG GGATACAGGC TTACCTTCCC TCTTTGACCG CTCAGCAGAT CAGGAGTATT
GACCTGCCGC CCCGGGGAGA AGGTCTGGGG ATTTGGGGAC GAATTCAGCA GGTAAGCTAT
AATGTGGCCC TGCCCATGGA CGACAGTTTT TACCTTCTCT CCTACCGCCC TGTGCAGACG
ATCAGGATCT TAGCGGCCAT GTTCGGGATT ATGCTCTTGA TCGAAGGGAT CACCTTGCTC
AGAAGCATTG CTTCCGGTGC CAGGGTCATC CGCCGTACAC TCCAGCCTAT TGAGCAATTG
GCCGAAACTG CCCGGAATTT AAGTCATGAA GGGATTTTCT CACCGGAACA GCTCAAGGAT
TTGGCGGGCA AACTGGATGA TATCAATGCC ACACATCTGG ATACGCGCAT TTCCGTGGAC
GAAACCCAGA GCGAGCTGCA AAGCCTGGCC GCTGCTATCA ACGGTATGCT GGACCGTATT
AACGAATCCT ACCGCTCTCA GGCGCGTTTT GTCTCCGATG CCTCCCATGA ACTCAGGACC
CCGATCTCCG TGATTCAAGG CTATGCCAAT CTGCTGGACC GCTGGGGTAA AAAGGATGAA
AAAACGCTCC AGGAATCCAT CGATGCCATC AAAAATGAGA CTGCCCATAT GAAGACCCTG
GTGGAACAGC TCTTGTTTCT CGCCCGGGGG GACAACAATA CTATGGCTCT GCAAATCGAG
TCCTTTGAAT TATCCGCTCT TGCCCAGGAG ATTCTGCGGG AAACCCAAAT GATCGATGGG
GGGCACGAAT ACTCCACCAT ACTTACTCCC GTTTATATCA AGGGAGATAA AGGCCTGATT
AAGCAAGCCA CCCGGATCCT CATGGACAAT GCTATGAAAT ATACCCCTGC CGGAAAGCAG
ATCACCCTCT CTGTTTCCAG CAAGGATAAC TTGGCCCGCC TCACGGTTCA GGACGAAGGA
ATCGGCATTG AACCGGAAGC GGTTCCTTTG ATTTTCGATC GGTTCTTCCG CACCGATGAG
TCCCGCACCC GGGCCACCGG CGGCTCAGGG CTGGGCCTGG CCATTGCCAA GTGGATTACG
GAACGGCACG GCGGGCACCT GGAAGTTCTC AGCCGGCTGG AAGTCGGCAC CCGGATCTCC
ATCGTTCTGC CCATGGTCCC GGAAGGGGAA GTTCACAAAG GGTAA
 
Protein sequence
MTNKSPTRPP GRIRNKMRFS IVWKLNIKLF FRLFWIFINL NICLILISAV GLFVHAEQTA 
GTVAEKLTQA GPPPPLEVDD WLELTPIRIE HSAAEPEGFR IPSGIQAYLP SLTAQQIRSI
DLPPRGEGLG IWGRIQQVSY NVALPMDDSF YLLSYRPVQT IRILAAMFGI MLLIEGITLL
RSIASGARVI RRTLQPIEQL AETARNLSHE GIFSPEQLKD LAGKLDDINA THLDTRISVD
ETQSELQSLA AAINGMLDRI NESYRSQARF VSDASHELRT PISVIQGYAN LLDRWGKKDE
KTLQESIDAI KNETAHMKTL VEQLLFLARG DNNTMALQIE SFELSALAQE ILRETQMIDG
GHEYSTILTP VYIKGDKGLI KQATRILMDN AMKYTPAGKQ ITLSVSSKDN LARLTVQDEG
IGIEPEAVPL IFDRFFRTDE SRTRATGGSG LGLAIAKWIT ERHGGHLEVL SRLEVGTRIS
IVLPMVPEGE VHKG