Gene Dhaf_2193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2193 
Symbol 
ID7259162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2369614 
End bp2370327 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content51% 
IMG OID643562083 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002458663 
Protein GI219668228 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0620475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGAAA AAAAGGTTAA AGTATTGGTT GTGGAAGATG AAGCGTCCAT CCGGCGTTTC 
ATTACCCTTA ACCTGGAGAT GGCCGGATAT GAGGTGGGAG AAGCGGAGAG CGGGGAAGAT
GCCCTGGCTC TCCTTACCGA ATTTCTCCCC GACTTGGTGG TGTTGGATCT GATGCTGCCG
GGGATAGACG GTTTGGAAGT TTGCCAGCAC ATTCGTGAAA CCATGCCGGA CCCTCTGATC
ATCATCCTGA CAGCTAAAGG GCAGGATACG GATAAAATTA TGGGGCTTGA ACTGGGAGCA
GATGATTATA TGGTCAAGCC CTTTAATCCC TTTGAGCTGA TTGCCAGAAT CAAAGCCATG
CTAAGACGCC GGGATCGCTA TGAAGCCGGA AGAACAGGCT ATACCTACGG CAGCCTGCAT
CTGGACACCG CCGCCAATAA ACTCCTCAAA AACAATCAGG AAGTGGAGCT GACCCCTACG
GAATATTCCC TGCTGAAAAT GTTTATGGAG AATCCGGGGA AAGCGCTGCG CAGAGAGGAA
ATGCTCAATG GGATCTGGGG AGAGGATTAT TTTGGGGATA CCAAAACTTT AGATGTGCAC
ATCCGGCGGC TCCGGGAAAA AATCGAGGAT AACCCCTCCG ATCCCCGGTA TATTAAAACC
ATCTGGGGTT CGGGTTACCG GTGGCAGCCG GAGATGGTCA GGAGGCTGCC ATGA
 
Protein sequence
MREKKVKVLV VEDEASIRRF ITLNLEMAGY EVGEAESGED ALALLTEFLP DLVVLDLMLP 
GIDGLEVCQH IRETMPDPLI IILTAKGQDT DKIMGLELGA DDYMVKPFNP FELIARIKAM
LRRRDRYEAG RTGYTYGSLH LDTAANKLLK NNQEVELTPT EYSLLKMFME NPGKALRREE
MLNGIWGEDY FGDTKTLDVH IRRLREKIED NPSDPRYIKT IWGSGYRWQP EMVRRLP