Gene Dhaf_2164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2164 
Symbol 
ID7259133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2330382 
End bp2331560 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content55% 
IMG OID643562054 
ProductABC transporter related 
Protein accessionYP_002458634 
Protein GI219668199 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGAC TGCTGCTCAA AAACATATCG AAAACCTATC CCGGCCAGGT CACCGCCGTC 
AGGAATCTTT CCCTGGAGAT CCAGGACAAA GAATTCCTGG TTTTGGTAGG CCCTTCCGGT
TGCGGCAAAA CAACAACTCT GAGAATGATC GCCGGCCTTG AGGATATTTC CGCCGGGGAA
CTCTATATCG GGGACAGACT GGTCAATGAT GTCCCTCCCA AAGACCGGGA TATCGCCATG
GTTTTTCAGA ATTATGCTCT TTATCCCCAC CTGTCGGTCT ACGACAATAT GGCTTTCGGG
CTTAAATTAA GGAAAATGCC TAAAGGGGAG ATCAGGCAAA ACGTGTTGGA AGCCGCCCGC
ATCCTTGACC TGGAAGATCT GCTGGGCCGC AAACCCAAGG AGCTTTCCGG CGGGCAGCGG
CAGAGGGTTG CCCTGGGGCG GGCCATGGTG AGAAAGCCTC AGGTGTTCTT GATGGATGAA
CCCCTGTCCA ATCTGGATGC CCAGTTAAGA ACCCAGATGC GCATAGAGAT CGCCAGGCTT
CATAAAAAGC TGGCCACAAC CTTTATCTAT GTGACCCATG ATCAAACGGA AGCCATGACC
ATGGGCACCC GGATTGTGGT GATGAAAGAA GGCCTTGTTC AGCAAGTGGA CACACCCCAG
CACATCTATA ACCACCCGGC CAATCGGTTC GCCGCCGGTT TTATCGGCAA TCCCAGAATG
AATTTCCTTG AAGTTTCTTT TAAAGAACAA AAGAACGGCC TCTGTGCCGG TCTGGGGGGG
GTTCTCCTGT CGGTTCCCCC TGTCCGGGGG GCGGCACTTC GGGCAAAAGG CTGCCGGCAG
GGCGGGAAGG CAATTCTGGG CATCAGAGCT GAACATCTTG CCTTGCGCCC CCTGGAGGGG
AGATTTCCGG CCTGCCCGCC GGAGCTGCCT TTGGTGCGGG GAAGGCTGGA ATTTACCGAG
CTGCGGGGAG CGGAGAACTA TCACTACGTC ACGGTTCAGG GAAGGGAGGT TGTGGTCAGA
GCCCAGCCGG AATACCGGGG AGAAGCAGGG CAGGAAGTGG AGATCGTTTT TAATCTGGCC
CAAGCTCATT TCTTTGCTCC GGAAAGCGGG GTGAATATGG AAACGGAGGG GCAGGAACAC
TGCGTATCCA GGGAACAAAT GGATAGTGGA CTTATGTAA
 
Protein sequence
MAGLLLKNIS KTYPGQVTAV RNLSLEIQDK EFLVLVGPSG CGKTTTLRMI AGLEDISAGE 
LYIGDRLVND VPPKDRDIAM VFQNYALYPH LSVYDNMAFG LKLRKMPKGE IRQNVLEAAR
ILDLEDLLGR KPKELSGGQR QRVALGRAMV RKPQVFLMDE PLSNLDAQLR TQMRIEIARL
HKKLATTFIY VTHDQTEAMT MGTRIVVMKE GLVQQVDTPQ HIYNHPANRF AAGFIGNPRM
NFLEVSFKEQ KNGLCAGLGG VLLSVPPVRG AALRAKGCRQ GGKAILGIRA EHLALRPLEG
RFPACPPELP LVRGRLEFTE LRGAENYHYV TVQGREVVVR AQPEYRGEAG QEVEIVFNLA
QAHFFAPESG VNMETEGQEH CVSREQMDSG LM