Gene Dhaf_2124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2124 
Symbol 
ID7259093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp2290607 
End bp2291092 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content39% 
IMG OID643562016 
Producttranscriptional regulator, CarD family 
Protein accessionYP_002458596 
Protein GI219668161 
COG category[K] Transcription 
COG ID[COG1329] Transcriptional regulators, similar to M. xanthus CarD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0696719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTTCAAG TTGGCGATAA GATTTTTTAT CCTTTGTATG GAGCAGGCAT AATAGAGGCC 
ATCAAAGAGA AGGAAGTCTT AGGAAAAAAA CAGTTTTACT ATTTCCTGAA TATCCCTCAC 
ATTAAACTGA AGATCATGAT TCCCATTGAA AGAACTCATG ATATAGGAAT ACGGGAAGTT 
GTAAAGCCTG ATGTCTTACA ACATGTGCTC GACGACCTAT ATAATGGAAC GACCGATCCC 
TTAAGTGATA ACAACCAAAG ATATCGCCGG GATATGAATA AATCCAAGAT AAAAACAGGG 
GATATCTACA AAGGCACCGA AGTAATCCGT GATTTGATGC GAAAAAGCAA AGTGAAGAAG 
TTAAGCGCAG AAGATAAAGC CATGTTGGAA AATGCCCTCC AAATCCTGAC CAGTGAATTC 
ATCCAGGTCA GAGGTGTTTG CAAAGAGCAA GCCGTTCATT TACTGAATGA AGTCATCAAT 
GTATAA
 
Protein sequence
MFQVGDKIFY PLYGAGIIEA IKEKEVLGKK QFYYFLNIPH IKLKIMIPIE RTHDIGIREV 
VKPDVLQHVL DDLYNGTTDP LSDNNQRYRR DMNKSKIKTG DIYKGTEVIR DLMRKSKVKK 
LSAEDKAMLE NALQILTSEF IQVRGVCKEQ AVHLLNEVIN V