| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2101 |
|---|
| Symbol | |
|---|
| ID | 7259070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 2264612 |
|---|
| End bp | 2265373 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643561993 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002458573 |
|---|
| Protein GI | 219668138 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.044107 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAATC TACAAGGCCG TGTGGCTGTT ATTACCGGAG CGTCCAGCGG ATTAGGCACC
CAAATGGCTC ATGGGCTGGC TGAACAAGGT GCCGATGTGG TGCTGTTGGC CCGCCGGGAG
GAGCGACTGC GTAAAGTGGC CGAAGATATT GAAAGCCAAT ACGGTGTCCA AGCCTATCCC
TTCCCTTGTG ACGTAACTCA ACTGGCCTCT GTTCAGGCCG CCGTTCAAGC TGCCCGGGAG
CGATTCGGCA AAGTGGATAT CCTTATTAAT AACGCCGGCA TCGGCTCCGT TGCACCTGCC
GAAACAATGG ACGATGAAGT ATGGGAACAT AATCTGTCCG TGGATCTGAC CGGTGTCTTT
CGTATCGCCC GCGAATTTGG CAAAGTCATG CTGGAAGCCG GTTATGGGCG TATTATCAAT
ATTTCTTCCA TGTACGGCAT GGTGGGAAAT TCAGCTACAC CCGCTTCCGC CTACCATGCA
GCCAAAGGCG GTGTGGTCAA TCTCACCCGG GCTTTGGCGG CGGAATGGGC CGACCGTGGT
GTCACCGTCA ATTGTCTCTG CCCAGGCTAT TTTGAAACGG AATTGACTGT CGATCTTCTG
AAGACGGAGG AATTCAAGGC TTATATGGAG CGCACCGTGC CCCTGAAACG TTACGGCAAT
TCCGGTGAAT TGAATTCCGC TGCCTGCTTC CTGGCGGCTG ATGAATCATC CTATGTGACC
GGAGCCATTC TACCCATTGA CGGCGGTTAC ACCTGCGTTT AA
|
|---|
| Protein sequence | MFNLQGRVAV ITGASSGLGT QMAHGLAEQG ADVVLLARRE ERLRKVAEDI ESQYGVQAYP
FPCDVTQLAS VQAAVQAARE RFGKVDILIN NAGIGSVAPA ETMDDEVWEH NLSVDLTGVF
RIAREFGKVM LEAGYGRIIN ISSMYGMVGN SATPASAYHA AKGGVVNLTR ALAAEWADRG
VTVNCLCPGY FETELTVDLL KTEEFKAYME RTVPLKRYGN SGELNSAACF LAADESSYVT
GAILPIDGGY TCV
|
|---|
| |