Gene Dhaf_2088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2088 
Symbol 
ID7259057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2251481 
End bp2252284 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content52% 
IMG OID643561981 
ProductABC transporter related 
Protein accessionYP_002458561 
Protein GI219668126 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0000943272 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA CACCTCTACT TTCGGCCAGC CATGTGGTGG CCGGTTATGA TCATAAAATT 
ATTCTCAATA CCATCGATCT GGTGATTCCC AGCAATAAAA TCAGTGTGAT CATCGGAGCC
AATGCCTGTG GTAAATCCAC CTTGTTAAAA ACTCTGGCCA GGCTGATCAA ACCTGTTTCC
GGTGAGGTTG CTCTTGACGG CAAGCCCATC AGCACCATTC CCCCCAAACA GCTGGCCCGG
GTTCTGGGCT TGCTTCCCCA GTCTCCGGTG GTCCCGGAAG GAATCGCCGT GGCGGACCTG
GTTTCCCGGG GAAGGTTTCC CTACCAGGGC TTTCTTAAGG GCTTAGGGAA AAAGGATTAT
GAGGCTGTGG AAGAGGCTCT GGAGATTATG GGAATCACAG AACTTGCCAA CCGCAGTGTG
GATGAATTGT CGGGAGGCCA GCGTCAGAGG GTCTGGATCG CCATGGCTCT CGCCCAGCAG
ACAGATATTC TGCTCCTGGA TGAACCGACT ACCTTTCTAG ACATCACCTA TCAGGTGGAA
ATTCTGGATC TGCTGACGGA TCTGAATCGG AAGCGGGGGA CCACTATCGT CATGGTCCTT
CACGATATCA ACCTGTCGGC CCGCTATGCG GATTATATCT TTGCCGTTCA TCAAGGGAAT
CTGATTGCCC AGGGAGCTCC TGGGGAGATT ATCACCGCAG ATTTGATGAA ACAGGTCTTT
GGACTGGACT GTGTGGTGGC CCGGGACCCG GTATCCGGTT CACCCTTTAT TGTACCGCGG
GGAAGATATC ATATCACTGC TTAG
 
Protein sequence
MKKTPLLSAS HVVAGYDHKI ILNTIDLVIP SNKISVIIGA NACGKSTLLK TLARLIKPVS 
GEVALDGKPI STIPPKQLAR VLGLLPQSPV VPEGIAVADL VSRGRFPYQG FLKGLGKKDY
EAVEEALEIM GITELANRSV DELSGGQRQR VWIAMALAQQ TDILLLDEPT TFLDITYQVE
ILDLLTDLNR KRGTTIVMVL HDINLSARYA DYIFAVHQGN LIAQGAPGEI ITADLMKQVF
GLDCVVARDP VSGSPFIVPR GRYHITA