Gene Dhaf_2044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2044 
Symbol 
ID7259013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp2204394 
End bp2205059 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content46% 
IMG OID643561937 
Producttranscriptional regulator, GntR family 
Protein accessionYP_002458517 
Protein GI219668082 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.00000000000328211 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAATTA TGAATACGCA AATTAATTGG AGAACAAAAA CCGAAATGAT CTATAGCACC 
CTTCGGGAAG CTATTGTATC CGGCGATATT AAAACCGGTG AGAAAATTGT TCTGAGTAAA 
GTGGCCAGCG ACCTCGGCGT AAGCCCGAGT CCGGTTCGCG AAGCCATCAA GCAATTAGCG 
GCGGAAGGAT TAATCGATCT GACCGCTCAT ACTGAAGCTG TGGTCAGCCG TTTGTCAGAA 
AAAGATTTTC GCGAGTTCAC TGAAATAAGG GTTATCCTGG AGTCTGAGGC GACAAAATGT 
GCAACGAAAC AAGTAACTCC GGAATTTATA GCAAAACTCG AAGATATTTT GGCAAAAATG 
CAGGAATGCG TGGATCAGGA AGATTCGAAG CGTTATGGTG TATTGAACCG TGAATTTCAT 
GAGACGATTT ATGAATCTTG CGGCAATGAG CAGCTGACAA AGCTGATTGA CTCTATTACT 
GTCAGGACGG ACCGGGCGCG GGCGGTTTTC AGCTATGACT ACTCACGCTT GATGGAATCC 
TTTCAGGAGC ATCAGGATAT TGTTGAGGCG ATCAAAGCCG GCCAGGCAGA GAAGGCGGGG 
GATATCGTTG CCACTCAAAC CCGGGCAGGT TTGGAATCGT ATTTAAAACA TTCTCTTAAT 
CAGTAG
 
Protein sequence
MPIMNTQINW RTKTEMIYST LREAIVSGDI KTGEKIVLSK VASDLGVSPS PVREAIKQLA 
AEGLIDLTAH TEAVVSRLSE KDFREFTEIR VILESEATKC ATKQVTPEFI AKLEDILAKM 
QECVDQEDSK RYGVLNREFH ETIYESCGNE QLTKLIDSIT VRTDRARAVF SYDYSRLMES 
FQEHQDIVEA IKAGQAEKAG DIVATQTRAG LESYLKHSLN Q