Gene Dhaf_1946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1946 
Symbol 
ID7258915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2091832 
End bp2092731 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content54% 
IMG OID643561842 
Productinner-membrane translocator 
Protein accessionYP_002458422 
Protein GI219667987 
COG category[R] General function prediction only 
COG ID[COG4120] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.463281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTGC TTCTCGGCTC CGTCCAGCTC GGATTAATCT ACGGCATGCT GGCTCTTGGC 
ATCTATATTT CCTTCCGCAT CCTCAACATT CCGGATCTTA CCGCCGATGG GAGCTTCACT
CTCGGACTCT CTGTGTCCGC TGTCATGACC CTGGCCGGCC ACCCTTTTCT CGGTATTCTG
CTGGCTGTTG CCGCCGGGGC TGCCGCGGGA ACCGTAACCG GGCTGCTGCA GACCAAACTG
GAGATCCATC CCATCCTTGC CGGAATTATT ACCATGAGCA GCTTGTACAG TATTAATCTC
TATATTCTCG GGAGCCGCTC CAACCTTTCC CTGATCGGCA GTGACAGCCT CTTCAGTCCC
CTGGCCTGGC TTCCGGCCAA CAAGGAAGTA TTGAAGACCC TGGTCCCCTT TATCGTTTGC
TTTCTTTGTG CCGCCGCTCT GATTTGGTTT TTCAAAACCC ATCTCGGCCT CTGCATACGG
GCCACCGGGA ATAACGAAGA CATGGTCAGA GCTTCCTCCA TCAATGTGGA TGCCATGAAA
ATCACGGCCA TAGCCATTTC CAACGCCTGC ATCGGACTGT CCGGCGCCGT CCTTGCCCAG
TATCAGGGAT ATGCCGACAT CAGCTCCGGC ATTGGCATCA TGGTGGTCGG TCTCGCTTCC
GCTATCATCG GAGAAGCCAT TTTCGGACGG CGTTCTTTGA CGATAGGGCT GCTCTCGGCC
ATCTTCGGCT CTCTTATTTA CCGCTTCATC ATCGCCGCCG CCCTGAAATC CAGCATTTTC
CCCGCCTATA TGCTCCGGGT TGTCTCAGCC GTGATCGTGG TGATTGCTTT ATCCCTGCCC
GTGATTAAAA AACACCTGGA ATTACGCAGC ATGAGAAAGC AGGTGGAGCA GGATGCTTAA
 
Protein sequence
MTLLLGSVQL GLIYGMLALG IYISFRILNI PDLTADGSFT LGLSVSAVMT LAGHPFLGIL 
LAVAAGAAAG TVTGLLQTKL EIHPILAGII TMSSLYSINL YILGSRSNLS LIGSDSLFSP
LAWLPANKEV LKTLVPFIVC FLCAAALIWF FKTHLGLCIR ATGNNEDMVR ASSINVDAMK
ITAIAISNAC IGLSGAVLAQ YQGYADISSG IGIMVVGLAS AIIGEAIFGR RSLTIGLLSA
IFGSLIYRFI IAAALKSSIF PAYMLRVVSA VIVVIALSLP VIKKHLELRS MRKQVEQDA