Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_1736 |
Symbol | |
ID | 7258705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 1865234 |
End bp | 1866754 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643561638 |
Product | choline/carnitine/betaine transporter |
Protein accession | YP_002458218 |
Protein GI | 219667783 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1292] Choline-glycine betaine transporter |
TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00814809 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGTG CAAGCAAAGT AGATAAAACG ATAGTATGGA GTTCACTGAT CGTTTCGTCA GCCTTTATCA TCGCTACACT GGTGACGCCA TCGGGTGTTT CCCAAATCCT CAATGCTATT TTTTCTTTTT TCACTAAGAA TCTGGGTTGG GCCTATATGT TATCGGCGGC TGCCTTTGTT GCCTTTGGTA TTGGTCTGGC CGTAAGCAAA TACGGCCATA TCAAGCTCGG TAAGGATGAT GAAGAGCCGG AGTACAGCCG GGGCAGCTGG TTTGCCATGC TGTTTGCTAC AGGCATGGGC GTCGGTCTGG TGTTCTGGGG CGCTGCCGAG CCGATTATGC ATTTTGACAC CTCTCCTTTC GCAGCCAACA GAACGCCGGA AGCAGCCAGC ATTGCCATGC GTACGGTGTT TTTCCACTGG GGACTGCATC CCTGGGCTTT GTATGGAGTG GTGGCAATGT CCCTGGCTTA TTTTCAATTC CGCAAAGGCC TGCCCGGCCT AATCAGCTCC ACATTTTACC CGTTAATCGG AGAGAAGGGC ATCAGAGGCC CGATCGGCAA AATCATTGAT GTCATTGCCG TTGTCGTAAC GCTATTCGGA GTCGCCACAT CCCTCGGACT GGGCACCCAA CAGCTTACCA CCGGAATGAA TTACGTCTAT GGTCTGCCGA ACACCACCTC TATGGCCCTG GTAATAATCG CGATCATCAC CATTTTGTTT ACCATCGCGG CTGCCAGCGG AATTGATAAA GGCATTAAAT TCGTCAGCAA TACCAATATG GTTCTTGCCT TCCTGCTGAT GCTTTTCCTC CTGATCGTCG GACCGACAAA ATATATCCTG AATACTTTTT TTGAATCGAT GGGTAATTAT CTGCAAAATT TTGTGTCCCT GAGCTTTTTT CTGGATACCC AGGGAGCAGT GGCCGAACGT ACAGGTTATG ATTGGATTGG CTCCTGGTCG GTTTTTTACT GGGCCTGGTG GATCACCTGG GCACCCTTTG TGGGAAGCTT TATTGCCCGG ATTTCCAGAG GGAGAACCAT TCGTGAATTT GTACTGGGTA TCCTTGTTGC GCCCCCCTTG TTAAGTGCCA TATGGTTCAG CATCGTCGGG GGCAGCGCTC TTCACATCGA GTTGTTTGGC AGTGGAGGAA TCAGCGCCGC CGTTGCCGAA GATGTCTCCA GCGGTATTTT TGCCATGCTC AGTCATTTCC CTTTAAGCGG TCCCGTGGCT TTGCTGACAA TGATCTTATT GGCGATATTC TTCATCACTT CGGCTGAGTC CGCGACCTTC GTTGTCGGCA TGTTTACTTC CGGCGGCGAT CTTAATCCGG ATGCCAGGCT GAAAATCGTC TGGGGTGTTG TGGAGGGAGC TATAGCTGCC ATGCTCCTCG TAGCCGGCGG GCTTTCCGCA GTTCAGACAG TTGCCTTTAT CTTTAGTTTT CCGTTCATGC TTATTATGAT CCTGATGGTA GTGAGCATGG TTAAGGCCTT GGGCGAGGGT GAGAAGAAGC CGCTGCAGTG A
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Protein sequence | MKSASKVDKT IVWSSLIVSS AFIIATLVTP SGVSQILNAI FSFFTKNLGW AYMLSAAAFV AFGIGLAVSK YGHIKLGKDD EEPEYSRGSW FAMLFATGMG VGLVFWGAAE PIMHFDTSPF AANRTPEAAS IAMRTVFFHW GLHPWALYGV VAMSLAYFQF RKGLPGLISS TFYPLIGEKG IRGPIGKIID VIAVVVTLFG VATSLGLGTQ QLTTGMNYVY GLPNTTSMAL VIIAIITILF TIAAASGIDK GIKFVSNTNM VLAFLLMLFL LIVGPTKYIL NTFFESMGNY LQNFVSLSFF LDTQGAVAER TGYDWIGSWS VFYWAWWITW APFVGSFIAR ISRGRTIREF VLGILVAPPL LSAIWFSIVG GSALHIELFG SGGISAAVAE DVSSGIFAML SHFPLSGPVA LLTMILLAIF FITSAESATF VVGMFTSGGD LNPDARLKIV WGVVEGAIAA MLLVAGGLSA VQTVAFIFSF PFMLIMILMV VSMVKALGEG EKKPLQ
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