Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_1732 |
Symbol | |
ID | 7258701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 1860832 |
End bp | 1861464 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643561634 |
Product | Methionine synthase |
Protein accession | YP_002458214 |
Protein GI | 219667779 |
COG category | [R] General function prediction only |
COG ID | [COG5012] Predicted cobalamin binding protein |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR02370] methyltransferase cognate corrinoid proteins, Methanosarcina family |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGATT TAACTAAGTT AGCGGATACC GTTTTCCGGG GAGATTTTGG CAGCGCCGGT CAAATCACCA AGGAGCTTAT CGATAGCGGA GTAGAGCCTC TAACCATCAT CAATCAGGGA CTGATCGCCG GTATGGATAT CGTGGCCCCT AAGTTTAAAG CCGGGGAAAT GTTTGTGCCG GAGGTTATGA TGGCGGCCAG AGCCATGGCC GTGGGCATGG AGGTGGTTAA GCCTTTGATT CAGGATGCGG ATATTCCTTC CAAGGGAACG GTCCTCATCG GCACGGTGGC CGGGGATCTT CACGATATCG GCAAAAATCT GGTGATCATG ATTCTGGAAA GCGGCGGCTT TAAGGTTGTG GATTTGGGTG TGGATGTCTC GGTGGAAAAA TTCGTGGCAG CGGCCAAGCA ATATAATCCT CAGGTCATTG GCATGTCCGC CTTGTTGACG ACGACCATGA CGGCGATGAA GGATACCATT GATGCCCTGA CGGAAGCCGG TTTGCGCAAG AACTTGAAGG TTATTGTGGG CGGAGCGCCT TTATCCCAGG AATTTGCCAG CCAAATCGGT GCGGACGGCT ATGCGGCGGA TGCCATGGCC GCCAAGGAGC TGTGTGAGAA ACTGGCGGTT TAA
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Protein sequence | MSDLTKLADT VFRGDFGSAG QITKELIDSG VEPLTIINQG LIAGMDIVAP KFKAGEMFVP EVMMAARAMA VGMEVVKPLI QDADIPSKGT VLIGTVAGDL HDIGKNLVIM ILESGGFKVV DLGVDVSVEK FVAAAKQYNP QVIGMSALLT TTMTAMKDTI DALTEAGLRK NLKVIVGGAP LSQEFASQIG ADGYAADAMA AKELCEKLAV
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